Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00861 and BSU04990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:18
# Commandline: needle
# -asequence dna-align/BSNT_00861___yddJ.1.22522.seq
# -bsequence dna-align/BSU04990___yddJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00861___yddJ-BSU04990___yddJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00861___yddJ-BSU04990___yddJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00861___yddJ
# 2: BSU04990___yddJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity: 366/390 (93.8%)
# Similarity: 366/390 (93.8%)
# Gaps: 9/390 ( 2.3%)
# Score: 1770.0
#
#
#=======================================
BSNT_00861___ 1 ATGTTTATTTTGAAAAACCTTTTTATTTTTCTTAGTTTGATGATGATGTT 50
||||||||||||||||||||.||||||||||||||||||||
BSU04990___yd 1 ---------TTGAAAAACCTTTTTATTTTCCTTAGTTTGATGATGATGTT 41
BSNT_00861___ 51 TGTTTTAACTGCATGTGGTGGAAGCAAGTATGATGATGCGATTGATGATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd 42 TGTTTTAACTGCATGTGGTGGAAGCAAGTATGATGATGCGATTGATGATG 91
BSNT_00861___ 101 TAATTAGCCAATATAAAGAGCATAAAGGAAATGACACAGAGATAAATATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd 92 TAATTAGCCAATATAAAGAGCATAAAGGAAATGACACAGAGATAAATATT 141
BSNT_00861___ 151 AAAAGAGAGAATGCGATTGTTAGAGTCTATGAAGGGGGCAAATATATTCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd 142 AAAAGAGAGAATGCGATTGTTAGAGTCTATGAAGGGGGCAAATATATTCA 191
BSNT_00861___ 201 GTTTGCATTTTATATGCCGGATAACTCTTCACGTGAATTAACAACATTTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd 192 GTTTGCATTTTATATGCCGGATAACTCTTCACGTGAATTAACAACATTTA 241
BSNT_00861___ 251 AGTATTATGAAAAAATAGGAGATAAATATGAAAAGATGACTGATATGCCG 300
||||||||||||||.|.|||||||||||||||||||||||||||||||||
BSU04990___yd 242 AGTATTATGAAAAATTTGGAGATAAATATGAAAAGATGACTGATATGCCG 291
BSNT_00861___ 301 GGGAATGGAGAAAATGATCGACTTGGCTTATCAAGGAAAACACCAGATTA 350
||||||||.|||||||||||.||.||.|||||||.||||||||||||.||
BSU04990___yd 292 GGGAATGGGGAAAATGATCGTCTGGGGTTATCAAAGAAAACACCAGACTA 341
BSNT_00861___ 351 TGAAGAAGCAAAAGGTAAAGAAACTAAGTTAGAGGAGTAA 390
||||||||.||||||..||||.||..||||||||||||||
BSU04990___yd 342 TGAAGAAGTAAAAGGAGAAGAGACAGAGTTAGAGGAGTAA 381
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