Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00861 and BSU04990

See Amino acid alignment / Visit BSNT_00861 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:18
# Commandline: needle
#    -asequence dna-align/BSNT_00861___yddJ.1.22522.seq
#    -bsequence dna-align/BSU04990___yddJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00861___yddJ-BSU04990___yddJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00861___yddJ-BSU04990___yddJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00861___yddJ
# 2: BSU04990___yddJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity:     366/390 (93.8%)
# Similarity:   366/390 (93.8%)
# Gaps:           9/390 ( 2.3%)
# Score: 1770.0
# 
#
#=======================================

BSNT_00861___      1 ATGTTTATTTTGAAAAACCTTTTTATTTTTCTTAGTTTGATGATGATGTT     50
                              ||||||||||||||||||||.||||||||||||||||||||
BSU04990___yd      1 ---------TTGAAAAACCTTTTTATTTTCCTTAGTTTGATGATGATGTT     41

BSNT_00861___     51 TGTTTTAACTGCATGTGGTGGAAGCAAGTATGATGATGCGATTGATGATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd     42 TGTTTTAACTGCATGTGGTGGAAGCAAGTATGATGATGCGATTGATGATG     91

BSNT_00861___    101 TAATTAGCCAATATAAAGAGCATAAAGGAAATGACACAGAGATAAATATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd     92 TAATTAGCCAATATAAAGAGCATAAAGGAAATGACACAGAGATAAATATT    141

BSNT_00861___    151 AAAAGAGAGAATGCGATTGTTAGAGTCTATGAAGGGGGCAAATATATTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd    142 AAAAGAGAGAATGCGATTGTTAGAGTCTATGAAGGGGGCAAATATATTCA    191

BSNT_00861___    201 GTTTGCATTTTATATGCCGGATAACTCTTCACGTGAATTAACAACATTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd    192 GTTTGCATTTTATATGCCGGATAACTCTTCACGTGAATTAACAACATTTA    241

BSNT_00861___    251 AGTATTATGAAAAAATAGGAGATAAATATGAAAAGATGACTGATATGCCG    300
                     ||||||||||||||.|.|||||||||||||||||||||||||||||||||
BSU04990___yd    242 AGTATTATGAAAAATTTGGAGATAAATATGAAAAGATGACTGATATGCCG    291

BSNT_00861___    301 GGGAATGGAGAAAATGATCGACTTGGCTTATCAAGGAAAACACCAGATTA    350
                     ||||||||.|||||||||||.||.||.|||||||.||||||||||||.||
BSU04990___yd    292 GGGAATGGGGAAAATGATCGTCTGGGGTTATCAAAGAAAACACCAGACTA    341

BSNT_00861___    351 TGAAGAAGCAAAAGGTAAAGAAACTAAGTTAGAGGAGTAA    390
                     ||||||||.||||||..||||.||..||||||||||||||
BSU04990___yd    342 TGAAGAAGTAAAAGGAGAAGAGACAGAGTTAGAGGAGTAA    381


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