Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00844 and BSU04900

See DNA alignment / Visit BSNT_00844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:16
# Commandline: needle
#    -asequence pep-align/BSNT_00844.1.22522.seq
#    -bsequence pep-align/BSU04900___yddA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00844-BSU04900___yddA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00844-BSU04900___yddA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00844
# 2: BSU04900___yddA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      42/102 (41.2%)
# Similarity:    43/102 (42.2%)
# Gaps:          59/102 (57.8%)
# Score: 208.0
# 
#
#=======================================

BSNT_00844         0 --------------------------------------------------      0
                                                                       
BSU04900___yd      1 MSAVDKRFKSLGFNVGIPSLVFVRSLSRDCMLVVEGERVKGFAEYRYTFY     50

BSNT_00844         1 ---------MTSLKVYMENQSIRRVLHRVASFLSFLERTKQIEQKECEKV     41
                              |||||||||||||:|||||||||||||||||||||||||||
BSU04900___yd     51 KTRYLPDGRMTSLKVYMENQSIKRVLHRVASFLSFLERTKQIEQKECEKV    100

BSNT_00844        42 AQ     43
                     ||
BSU04900___yd    101 AQ    102


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