Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00844 and BSU04900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:16
# Commandline: needle
# -asequence dna-align/BSNT_00844.1.22522.seq
# -bsequence dna-align/BSU04900___yddA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00844-BSU04900___yddA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00844-BSU04900___yddA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00844
# 2: BSU04900___yddA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity: 130/309 (42.1%)
# Similarity: 130/309 (42.1%)
# Gaps: 177/309 (57.3%)
# Score: 642.0
#
#
#=======================================
BSNT_00844 0 -------------------------------------------------- 0
BSU04900___yd 1 GTGTCTGCTGTAGATAAACGATTCAAAAGCTTAGGTTTTAATGTGGGCAT 50
BSNT_00844 0 -------------------------------------------------- 0
BSU04900___yd 51 TCCCTCTTTAGTTTTTGTGAGAAGTTTAAGCAGAGATTGCATGTTGGTTG 100
BSNT_00844 0 -------------------------------------------------- 0
BSU04900___yd 101 TTGAAGGAGAACGAGTAAAAGGATTTGCTGAGTATCGTTACACATTCTAT 150
BSNT_00844 1 ---------------------------ATGACTAGTTTAAAAGTTTATAT 23
||||||||.||||||||||||||
BSU04900___yd 151 AAAACAAGATACTTGCCAGACGGTCGAATGACTAGCTTAAAAGTTTATAT 200
BSNT_00844 24 GGAGAATCAAAGCATAAGAAGGGTGTTACATCGTGTAGCATCCTTTTTAT 73
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU04900___yd 201 GGAGAATCAAAGCATAAAAAGGGTGTTACATCGTGTAGCATCCTTTTTAT 250
BSNT_00844 74 CTTTCTTGGAAAGAACGAAACAAATTGAACAGAAGGAGTGTGAAAAAGTT 123
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04900___yd 251 CTTTCTTGGAAAGAACGAAACAAATTGAACAGAAGGAGTGTGAAAAAGTT 300
BSNT_00844 124 GCTCAATAA 132
|||||||||
BSU04900___yd 301 GCTCAATAA 309
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