Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00840 and BSU04870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:16
# Commandline: needle
# -asequence pep-align/BSNT_00840___ydcR.1.22522.seq
# -bsequence pep-align/BSU04870___ydcR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00840___ydcR-BSU04870___ydcR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00840___ydcR-BSU04870___ydcR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00840___ydcR
# 2: BSU04870___ydcR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 338/352 (96.0%)
# Similarity: 348/352 (98.9%)
# Gaps: 0/352 ( 0.0%)
# Score: 1801.0
#
#
#=======================================
BSNT_00840___ 1 MDELKHPPHANRGVVIVKEENETVESPLVSMVDYIRVSFKTHDVDRIIEE 50
|||||.|||||||||||||:||.|||||||||||||||||||||||||||
BSU04870___yd 1 MDELKQPPHANRGVVIVKEKNEAVESPLVSMVDYIRVSFKTHDVDRIIEE 50
BSNT_00840___ 51 VLHLSKDFMTEKQSGFYGYVGTYELDYVKVFYSAPDDNRGVLIEMSGQGC 100
|||||||||||||||||||||||||||:||||||||||||||||||||||
BSU04870___yd 51 VLHLSKDFMTEKQSGFYGYVGTYELDYIKVFYSAPDDNRGVLIEMSGQGC 100
BSNT_00840___ 101 RQFESFLECRKKTWYDFFQDCMQQGGSFTRFDLAIDDKKTYFSIPELLKK 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04870___yd 101 RQFESFLECRKKTWYDFFQDCMQQGGSFTRFDLAIDDKKTYFSIPELLKK 150
BSNT_00840___ 151 AQKGECISRFRKSDFNGSLGLSDGITGGTTIYFGSKKSEAYLCFYEKNYE 200
||||||||||||||||||..||||||||||||||||||||||||||||||
BSU04870___yd 151 AQKGECISRFRKSDFNGSFDLSDGITGGTTIYFGSKKSEAYLCFYEKNYE 200
BSNT_00840___ 201 QAEKYNIPLEELGDWNRYELRLKNERAQVAIDALLKTKDLTLIAMQIINN 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04870___yd 201 QAEKYNIPLEELGDWNRYELRLKNERAQVAIDALLKTKDLTLIAMQIINN 250
BSNT_00840___ 251 YVRFVDADENITREHWKTSLFWSEFIGDVGKLPLYVKPQKDFYQKSRNWL 300
|||||||||||||||||||||||:||||||:|||||||||||||||||||
BSU04870___yd 251 YVRFVDADENITREHWKTSLFWSDFIGDVGRLPLYVKPQKDFYQKSRNWL 300
BSNT_00840___ 301 RNSCAPTMKMVLEADQHLGKTDLSDMIAEAELAEKHEKMLNVFIADVADM 350
|||||||||||||||:|||||||||||||||||:||:|||:|::||||||
BSU04870___yd 301 RNSCAPTMKMVLEADEHLGKTDLSDMIAEAELADKHKKMLDVYMADVADM 350
BSNT_00840___ 351 VV 352
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BSU04870___yd 351 VV 352
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