Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00839 and BSU04860

See DNA alignment / Visit BSNT_00839 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:15
# Commandline: needle
#    -asequence pep-align/BSNT_00839.1.22522.seq
#    -bsequence pep-align/BSU04860___ydcQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00839-BSU04860___ydcQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00839-BSU04860___ydcQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00839
# 2: BSU04860___ydcQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     236/480 (49.2%)
# Similarity:   237/480 (49.4%)
# Gaps:         243/480 (50.6%)
# Score: 1202.0
# 
#
#=======================================

BSNT_00839         0 --------------------------------------------------      0
                                                                       
BSU04860___yd      1 MSDFLNKRFWKYRGKRIRPYMRNNVKLAGAIIFVPVFLLSMFLFWREQLI     50

BSNT_00839         0 --------------------------------------------------      0
                                                                       
BSU04860___yd     51 HFDLSQVIKNFEWNVPLIIKSVLCSVLIAVGSIVASYFLLFDSYKKILHR    100

BSNT_00839         0 --------------------------------------------------      0
                                                                       
BSU04860___yd    101 QKIAKMIFSNKFYEKENVKVRKIFSNETDSKEKITYFPRMYYQVKNNHIY    150

BSNT_00839         0 --------------------------------------------------      0
                                                                       
BSU04860___yd    151 IRIAMDMSRFQNRFLDLGKDLENGLFCDLVDKQMEEGFVCFKLLYDVKKN    200

BSNT_00839         1 -------------------------------------------MLTIIKA      7
                                                                |||||||
BSU04860___yd    201 RISIDDAVAENGVLPLMKHISWQFDKLPHMLIAGGTGGGKTYFMLTIIKA    250

BSNT_00839         8 CVGLGADVRILDPKNADLADLEEVLPKKVYSQKNGILMCLRKSVDGMMER     57
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd    251 CVGLGADVRILDPKNADLADLEEVLPKKVYSQKNGILMCLRKSVDGMMER    300

BSNT_00839        58 MDEMKQMSNYKTGENYAYLGLKPVFIFFDEYVAFMDLLDMKERNEALSYM    107
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd    301 MDEMKQMSNYKTGENYAYLGLKPVFIFFDEYVAFMDLLDMKERNEALSYM    350

BSNT_00839       108 KQLVMLGRQAGYFLVLGAQRPDAKYLADGIRDQFSFRVSLGLMSDTGYGM    157
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd    351 KQLVMLGRQAGYFLVLGAQRPDAKYLADGIRDQFSFRVSLGLMSDTGYGM    400

BSNT_00839       158 MFGDVDKAYVNKKETGRGYANVGTGSVLEFYSPIVPKGYDFMSSIKNALV    207
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd    401 MFGDVEKAYVNKKETGRGYANVGTGSVLEFYSPIVPKGYDFMSSIKNALV    450

BSNT_00839       208 GVEGAQATAVASGSVSDQTASGEGVSEANG    237
                     ||||||||||||||||||||||||||||||
BSU04860___yd    451 GVEGAQATAVASGSVSDQTASGEGVSEANG    480


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