Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00839 and BSU04860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:16
# Commandline: needle
# -asequence dna-align/BSNT_00839.1.22522.seq
# -bsequence dna-align/BSU04860___ydcQ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00839-BSU04860___ydcQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00839-BSU04860___ydcQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00839
# 2: BSU04860___ydcQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1443
# Identity: 693/1443 (48.0%)
# Similarity: 693/1443 (48.0%)
# Gaps: 729/1443 (50.5%)
# Score: 3381.0
#
#
#=======================================
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 1 ATGAGTGATTTCTTAAACAAAAGATTTTGGAAATACAGGGGCAAACGAAT 50
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 51 CCGCCCGTACATGAGAAACAACGTAAAGTTAGCAGGCGCAATCATCTTTG 100
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 101 TGCCTGTTTTTTTATTGTCTATGTTCCTTTTTTGGAGAGAACAACTCATT 150
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 151 CATTTTGATCTATCTCAAGTGATAAAAAATTTTGAATGGAATGTGCCTTT 200
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 201 AATCATTAAAAGCGTTTTATGCTCTGTGCTAATTGCTGTTGGAAGCATAG 250
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 251 TTGCATCTTACTTTCTTTTGTTTGACAGCTATAAGAAAATCCTTCACAGG 300
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 301 CAAAAGATTGCTAAAATGATTTTCTCTAACAAGTTTTACGAAAAAGAAAA 350
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 351 CGTGAAAGTAAGAAAAATCTTTTCAAATGAAACTGACTCAAAGGAAAAGA 400
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 401 TCACATACTTTCCTAGAATGTATTACCAGGTCAAAAACAACCACATCTAT 450
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 451 ATTCGTATTGCTATGGACATGAGCCGTTTTCAGAATCGCTTCCTAGACTT 500
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 501 AGGAAAGGATTTGGAAAACGGCTTATTTTGTGACTTGGTTGATAAACAAA 550
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 551 TGGAAGAAGGTTTTGTATGCTTTAAGCTTCTTTACGATGTCAAAAAGAAT 600
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 601 CGTATTTCCATTGATGATGCAGTAGCTGAGAATGGAGTCCTTCCGTTAAT 650
BSNT_00839 0 -------------------------------------------------- 0
BSU04860___yd 651 GAAGCATATCTCATGGCAATTTGATAAGTTGCCGCACATGCTTATTGCTG 700
BSNT_00839 1 -----------------------------ATGCTAACGATCATTAAGGCA 21
|||||||||||||||||||||
BSU04860___yd 701 GTGGTACAGGTGGAGGGAAAACATACTTCATGCTAACGATCATTAAGGCA 750
BSNT_00839 22 TGTGTTGGACTGGGGGCAGATGTAAGAATACTAGACCCTAAAAATGCAGA 71
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 751 TGTGTTGGACTGGGGGCAGATGTAAGAATACTAGACCCTAAAAATGCAGA 800
BSNT_00839 72 TTTAGCAGACTTGGAAGAAGTACTTCCGAAAAAGGTCTATTCCCAAAAGA 121
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 801 TTTAGCAGACTTGGAAGAAGTACTTCCGAAAAAGGTCTATTCCCAAAAGA 850
BSNT_00839 122 ACGGTATTCTTATGTGCCTGAGAAAGTCTGTAGATGGCATGATGGAACGA 171
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 851 ACGGTATTCTTATGTGCCTGAGAAAGTCTGTAGATGGCATGATGGAACGA 900
BSNT_00839 172 ATGGATGAAATGAAGCAAATGTCTAACTATAAGACAGGTGAAAACTATGC 221
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 901 ATGGATGAAATGAAGCAAATGTCTAACTATAAGACAGGTGAAAACTATGC 950
BSNT_00839 222 CTATTTAGGCTTAAAACCTGTTTTTATCTTCTTTGATGAATATGTGGCGT 271
.|||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04860___yd 951 TTATTTAGGCTTAAAACCTGTTTTTATCTTCTTTGATGAATATGTGGCAT 1000
BSNT_00839 272 TTATGGATTTGTTAGATATGAAAGAAAGAAACGAAGCCCTTTCTTACATG 321
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 1001 TTATGGATTTGTTAGATATGAAAGAAAGAAACGAAGCCCTTTCTTACATG 1050
BSNT_00839 322 AAACAGTTGGTCATGTTGGGGAGACAGGCGGGTTACTTTCTCGTTTTAGG 371
||||||||||||||||||||||||||||||||.||.||||||||||||||
BSU04860___yd 1051 AAACAGTTGGTCATGTTGGGGAGACAGGCGGGGTATTTTCTCGTTTTAGG 1100
BSNT_00839 372 GGCACAACGTCCAGATGCAAAATATTTGGCTGACGGTATTCGAGATCAGT 421
.||||||||||||||||||||||||||.||||||||||||||.|||||||
BSU04860___yd 1101 CGCACAACGTCCAGATGCAAAATATTTAGCTGACGGTATTCGTGATCAGT 1150
BSNT_00839 422 TTAGCTTCCGTGTGTCGTTAGGTTTAATGTCAGATACGGGCTACGGGATG 471
|||||||.|||||.||.||.|||||||||||.||||||||.|||||.|||
BSU04860___yd 1151 TTAGCTTTCGTGTTTCATTGGGTTTAATGTCCGATACGGGTTACGGAATG 1200
BSNT_00839 472 ATGTTTGGTGATGTTGATAAAGCATATGTGAATAAAAAAGAGACAGGGCG 521
||||||||.||||||||.||||||||||||||||||||.|||||||||||
BSU04860___yd 1201 ATGTTTGGCGATGTTGAAAAAGCATATGTGAATAAAAAGGAGACAGGGCG 1250
BSNT_00839 522 AGGATATGCCAATGTTGGCACTGGTTCAGTGTTGGAATTTTACAGCCCTA 571
|||||||||||||||.|||||.||||||||||||||.|||||||||||||
BSU04860___yd 1251 AGGATATGCCAATGTGGGCACAGGTTCAGTGTTGGAGTTTTACAGCCCTA 1300
BSNT_00839 572 TCGTGCCGAAAGGATATGATTTTATGTCGTCTATTAAAAATGCGCTGGTT 621
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04860___yd 1301 TCGTGCCGAAAGGATATGATTTTATGTCATCTATTAAAAATGCGCTGGTT 1350
BSNT_00839 622 GGAGTCGAGGGAGCGCAGGCGACGGCAGTCGCCAGCGGCAGCGTAAGCGA 671
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 1351 GGAGTCGAGGGAGCGCAGGCGACGGCAGTCGCCAGCGGCAGCGTAAGCGA 1400
BSNT_00839 672 CCAGACGGCCAGCGGCGAAGGAGTGAGCGAAGCGAATGGATGA 714
|||||||||||||||||||||||||||||||||||||||||||
BSU04860___yd 1401 CCAGACGGCCAGCGGCGAAGGAGTGAGCGAAGCGAATGGATGA 1443
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