Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00786 and BSU04580

See DNA alignment / Visit BSNT_00786 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:11
# Commandline: needle
#    -asequence pep-align/BSNT_00786___ydbR.1.22522.seq
#    -bsequence pep-align/BSU04580___cshA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00786___ydbR-BSU04580___cshA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00786___ydbR-BSU04580___cshA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00786___ydbR
# 2: BSU04580___cshA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity:     493/511 (96.5%)
# Similarity:   494/511 (96.7%)
# Gaps:          17/511 ( 3.3%)
# Score: 2484.0
# 
#
#=======================================

BSNT_00786___      1 -----------------MTITFQDFNLSSDLMKAINRMGFEEATPIQAQT     33
                                      :||||||||||||||||||||||||||||||||
BSU04580___cs      1 MVNHDITETAIRRSLNNLTITFQDFNLSSDLMKAINRMGFEEATPIQAQT     50

BSNT_00786___     34 IPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTREL     83
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs     51 IPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTREL    100

BSNT_00786___     84 AIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLL    133
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    101 AIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLL    150

BSNT_00786___    134 DHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS    183
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    151 DHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS    200

BSNT_00786___    184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLT    233
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    201 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLT    250

BSNT_00786___    234 RLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA    283
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    251 RLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA    300

BSNT_00786___    284 LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTG    333
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    301 LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTG    350

BSNT_00786___    334 RAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVT    383
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    351 RAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVT    400

BSNT_00786___    384 VERLRTTISENNLNFYMTAAAELLEDHDAVTVVAAAIKMATKEPDDTPVR    433
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    401 VERLRTTISENNLNFYMTAAAELLEDHDAVTVVAAAIKMATKEPDDTPVR    450

BSNT_00786___    434 LTDEAPMVSKRYKNQRSSKRRDGQGGGYRGGKGKSNNRSSYDKKRSNDRR    483
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs    451 LTDEAPMVSKRYKNQRSSKRRDGQGGGYRGGKGKSNNRSSYDKKRSNDRR    500

BSNT_00786___    484 SSGDRRQKKSY    494
                     |||||||||||
BSU04580___cs    501 SSGDRRQKKSY    511


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.