Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00786 and BSU04580
See
Amino acid alignment /
Visit
BSNT_00786 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:11
# Commandline: needle
# -asequence dna-align/BSNT_00786___ydbR.1.22522.seq
# -bsequence dna-align/BSU04580___cshA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00786___ydbR-BSU04580___cshA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00786___ydbR-BSU04580___cshA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00786___ydbR
# 2: BSU04580___cshA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1536
# Identity: 1472/1536 (95.8%)
# Similarity: 1472/1536 (95.8%)
# Gaps: 51/1536 ( 3.3%)
# Score: 7308.0
#
#
#=======================================
BSNT_00786___ 0 -------------------------------------------------- 0
BSU04580___cs 1 GTGGTAAATCACGACATTACTGAAACAGCAATTAGAAGGAGTTTGAATAA 50
BSNT_00786___ 1 -TTGACTATAACGTTTCAAGATTTTAATTTAAGTTCTGATCTCATGAAAG 49
|||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 51 TTTGACTATAACGTTTCAAGATTTTAATTTAAGTTCTGATCTCATGAAAG 100
BSNT_00786___ 50 CAATTAATCGTATGGGATTTGAAGAAGCAACACCGATTCAGGCACAAACG 99
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 101 CAATTAATCGTATGGGATTTGAAGAAGCAACACCGATTCAGGCACAAACG 150
BSNT_00786___ 100 ATACCGCTCGGACTTTCAAATAAAGACGTCATTGGACAAGCGCAAACAGG 149
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 151 ATACCGCTCGGACTTTCAAATAAAGACGTCATTGGACAAGCGCAAACAGG 200
BSNT_00786___ 150 TACAGGTAAAACAGCTGCGTTTGGTATACCCCTTGTTGAAAAAATTAACC 199
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 201 TACAGGTAAAACAGCTGCGTTTGGTATACCCCTTGTTGAAAAAATTAACC 250
BSNT_00786___ 200 CCGAGTCTCCTAATATTCAAGCAATCGTAATCGCGCCAACCCGTGAATTA 249
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 251 CCGAGTCTCCTAATATTCAAGCAATCGTAATCGCGCCAACCCGTGAATTA 300
BSNT_00786___ 250 GCCATTCAAGTATCTGAAGAATTGTATAAAATCGGACAAGATAAACGTGC 299
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 301 GCCATTCAAGTATCTGAAGAATTGTATAAAATCGGACAAGATAAACGTGC 350
BSNT_00786___ 300 GAAGGTTCTTCCTATTTACGGCGGACAGGATATTGGACGGCAAATCCGGG 349
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 351 GAAGGTTCTTCCTATTTACGGCGGACAGGATATTGGACGGCAAATCCGGG 400
BSNT_00786___ 350 CGTTAAAGAAGAATCCGAATATTATTGTCGGAACACCTGGACGTCTTCTT 399
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 401 CGTTAAAGAAGAATCCGAATATTATTGTCGGAACACCTGGACGTCTTCTT 450
BSNT_00786___ 400 GACCACATCAATCGCCGCACCATTCGTTTAAACAATGTAAATACTGTTGT 449
|||||||||||.||||||||||||||||||||||||||||||||.|||||
BSU04580___cs 451 GACCACATCAACCGCCGCACCATTCGTTTAAACAATGTAAATACCGTTGT 500
BSNT_00786___ 450 AATGGATGAAGCGGATGAAATGCTGAACATGGGATTCATTGATGATATTG 499
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04580___cs 501 AATGGATGAAGCGGATGAAATGCTGAACATGGGATTCATTGACGATATTG 550
BSNT_00786___ 500 AATCTATCCTTTCAAACGTGCCAAGCGAGCATCAGACACTTCTGTTCTCT 549
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 551 AATCTATCCTTTCAAACGTGCCAAGCGAGCATCAGACACTTCTGTTCTCT 600
BSNT_00786___ 550 GCCACAATGCCTGCGCCGATCAAACGCATTGCAGAGCGCTTTATGACTGA 599
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04580___cs 601 GCCACAATGCCTGCGCCGATCAAACGCATTGCAGAGCGCTTCATGACTGA 650
BSNT_00786___ 600 GCCGGAACACGTAAAAGTAAAAGCGAAAGAAATGACGGTTTCTAACATTC 649
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 651 GCCGGAACACGTAAAAGTAAAAGCGAAAGAAATGACGGTTTCTAACATTC 700
BSNT_00786___ 650 AGCAGTTCTATTTGGAAGTGCAAGAACGCAAAAAATTCGATACACTGACT 699
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04580___cs 701 AGCAGTTCTATTTGGAAGTGCAAGAACGTAAAAAATTCGATACACTGACT 750
BSNT_00786___ 700 CGTCTTCTTGACATTCAGTCTCCTGAGCTTGCGATCGTATTCGGACGTAC 749
||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU04580___cs 751 CGCCTTCTTGATATTCAGTCTCCTGAGCTTGCGATCGTATTCGGACGTAC 800
BSNT_00786___ 750 AAAACGCCGTGTCGATGAACTGGCTGAAGCCCTGAACCTTCGCGGATATG 799
||||||||||||||||||.|||||||||||.|||||||||||||||||||
BSU04580___cs 801 AAAACGCCGTGTCGATGAGCTGGCTGAAGCTCTGAACCTTCGCGGATATG 850
BSNT_00786___ 800 CAGCTGAAGGAATTCACGGTGACTTAACGCAGGCGAAACGTATGGTTGCG 849
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04580___cs 851 CAGCTGAAGGTATTCACGGTGACTTAACGCAGGCGAAACGTATGGTTGCG 900
BSNT_00786___ 850 CTTCGTAAATTTAAAGAAGGCGCAATCGAAGTTCTTGTCGCAACTGATGT 899
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU04580___cs 901 CTTCGTAAATTTAAAGAAGGCGCAATCGAAGTTCTAGTCGCAACTGATGT 950
BSNT_00786___ 900 TGCCGCTCGCGGACTTGATATCTCAGGTGTTACACACGTATACAACTTCG 949
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 951 TGCCGCTCGCGGACTTGATATCTCAGGTGTTACACACGTATACAACTTCG 1000
BSNT_00786___ 950 ACGTGCCTCAAGATCCTGAAAGCTACGTTCACCGTATCGGAAGAACGGGC 999
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1001 ACGTGCCTCAAGATCCTGAAAGCTACGTTCACCGTATCGGAAGAACGGGC 1050
BSNT_00786___ 1000 CGTGCAGGAAAAACAGGTATGGCGATGACGTTCATTACACCGCGTGAGAA 1049
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1051 CGTGCAGGAAAAACAGGTATGGCGATGACGTTCATTACACCGCGTGAGAA 1100
BSNT_00786___ 1050 AAGCATGCTTCGCGCAATTGAACAAACAACAAAACGCAAAATGGACCGCA 1099
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1101 AAGCATGCTTCGCGCAATTGAACAAACAACAAAACGCAAAATGGACCGCA 1150
BSNT_00786___ 1100 TGAAGGAGCCTACACTTGATGAAGCGTTAGAAGGCCAGCAACAGGTTACT 1149
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU04580___cs 1151 TGAAGGAGCCTACACTTGATGAAGCGTTAGAAGGTCAGCAACAGGTTACT 1200
BSNT_00786___ 1150 GTTGAACGTCTTCGCACAACAATCAGTGAAAACAACCTGAACTTCTACAT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1201 GTTGAACGTCTTCGCACAACAATCAGTGAAAACAACCTGAACTTCTACAT 1250
BSNT_00786___ 1200 GACAGCGGCAGCTGAGCTGCTTGAAGATCATGATGCAGTAACAGTGGTTG 1249
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1251 GACAGCGGCAGCTGAGCTGCTTGAAGATCATGATGCAGTAACAGTGGTTG 1300
BSNT_00786___ 1250 CGGCGGCTATCAAAATGGCTACTAAAGAGCCAGACGACACACCGGTTCGC 1299
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU04580___cs 1301 CGGCGGCTATCAAAATGGCTACAAAAGAGCCAGACGACACACCGGTTCGC 1350
BSNT_00786___ 1300 TTAACAGACGAAGCGCCGATGGTCAGCAAACGCTACAAGAACCAGCGCTC 1349
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1351 TTAACAGACGAAGCGCCGATGGTCAGCAAACGCTACAAGAACCAGCGCTC 1400
BSNT_00786___ 1350 TTCTAAACGCAGAGACGGTCAAGGCGGCGGCTACCGCGGCGGAAAAGGGA 1399
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1401 TTCTAAACGCAGAGACGGTCAAGGCGGCGGCTACCGCGGCGGAAAAGGGA 1450
BSNT_00786___ 1400 AAAGCAACAACCGTTCTTCCTATGACAAAAAGCGTTCAAACGATCGCCGT 1449
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04580___cs 1451 AAAGCAACAACCGTTCTTCCTATGACAAAAAGCGTTCAAACGATCGCCGT 1500
BSNT_00786___ 1450 TCTTCAGGTGACAGACGCCAGAAAAAATCTTACTAA 1485
||||||||||||||||||||||||||||||||||||
BSU04580___cs 1501 TCTTCAGGTGACAGACGCCAGAAAAAATCTTACTAA 1536
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.