Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00761 and BSU04410

See DNA alignment / Visit BSNT_00761 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:08
# Commandline: needle
#    -asequence pep-align/BSNT_00761___ydbB.1.22522.seq
#    -bsequence pep-align/BSU04410___ydbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00761___ydbB-BSU04410___ydbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00761___ydbB-BSU04410___ydbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00761___ydbB
# 2: BSU04410___ydbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     112/113 (99.1%)
# Similarity:   112/113 (99.1%)
# Gaps:           0/113 ( 0.0%)
# Score: 588.0
# 
#
#=======================================

BSNT_00761___      1 MSKMQNLLAIANEVKEKHANFSISEVNDHCVRLAVFTGEYDWHHHPDSDE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd      1 MSKMQNLLAIANEVKEKHANFSISEVNDHCVRLAVFTGEYDWHHHPDSDE     50

BSNT_00761___     51 LFIVLEGELLIDFKDKETAVLKTNDSLLIPKGTVHRTRSYVRTVNLCVEH    100
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU04410___yd     51 LFIVLEGELLIDFKDKETAVLKANDSLLIPKGTVHRTRSYVRTVNLCVEH    100

BSNT_00761___    101 KQAETVIIEEQPC    113
                     |||||||||||||
BSU04410___yd    101 KQAETVIIEEQPC    113


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.