Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00761 and BSU04410

See Amino acid alignment / Visit BSNT_00761 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:08
# Commandline: needle
#    -asequence dna-align/BSNT_00761___ydbB.1.22522.seq
#    -bsequence dna-align/BSU04410___ydbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00761___ydbB-BSU04410___ydbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00761___ydbB-BSU04410___ydbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00761___ydbB
# 2: BSU04410___ydbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     340/342 (99.4%)
# Similarity:   340/342 (99.4%)
# Gaps:           0/342 ( 0.0%)
# Score: 1692.0
# 
#
#=======================================

BSNT_00761___      1 ATGTCCAAGATGCAAAACTTGCTCGCCATCGCAAATGAAGTCAAAGAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd      1 ATGTCCAAGATGCAAAACTTGCTCGCCATCGCAAATGAAGTCAAAGAAAA     50

BSNT_00761___     51 GCACGCCAATTTTTCAATCTCAGAGGTCAACGACCACTGCGTGCGCCTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd     51 GCACGCCAATTTTTCAATCTCAGAGGTCAACGACCACTGCGTGCGCCTTG    100

BSNT_00761___    101 CGGTGTTTACGGGAGAATATGACTGGCACCATCACCCTGACTCAGACGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd    101 CGGTGTTTACGGGAGAATATGACTGGCACCATCACCCTGACTCAGACGAA    150

BSNT_00761___    151 TTGTTTATTGTTCTTGAAGGGGAGCTGCTGATCGATTTTAAGGACAAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd    151 TTGTTTATTGTTCTTGAAGGGGAGCTGCTGATCGATTTTAAGGACAAAGA    200

BSNT_00761___    201 AACCGCGGTGCTCAAAACAAATGACAGCCTGCTGATCCCGAAAGGCACGG    250
                     ||||||||||||||||.||||||||||||||||||||||.||||||||||
BSU04410___yd    201 AACCGCGGTGCTCAAAGCAAATGACAGCCTGCTGATCCCTAAAGGCACGG    250

BSNT_00761___    251 TTCACCGCACACGCTCTTACGTCAGAACGGTAAATCTCTGTGTGGAGCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd    251 TTCACCGCACACGCTCTTACGTCAGAACGGTAAATCTCTGTGTGGAGCAT    300

BSNT_00761___    301 AAACAAGCCGAAACCGTCATCATAGAGGAGCAGCCATGCTAA    342
                     ||||||||||||||||||||||||||||||||||||||||||
BSU04410___yd    301 AAACAAGCCGAAACCGTCATCATAGAGGAGCAGCCATGCTAA    342


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