Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00740 and BSU04250

See DNA alignment / Visit BSNT_00740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:06
# Commandline: needle
#    -asequence pep-align/BSNT_00740.1.22522.seq
#    -bsequence pep-align/BSU04250___lrpC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00740-BSU04250___lrpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00740-BSU04250___lrpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00740
# 2: BSU04250___lrpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:     144/180 (80.0%)
# Similarity:   144/180 (80.0%)
# Gaps:          36/180 (20.0%)
# Score: 727.0
# 
#
#=======================================

BSNT_00740         1 MFGKHSFLHAFSRELYLSFTKIPEIMCTKSKKKDVEMKLDQIDLNIIEEL     50
                                                         ||||||||||||||
BSU04250___lr      1 ------------------------------------MKLDQIDLNIIEEL     14

BSNT_00740        51 KKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr     15 KKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLP     64

BSNT_00740       101 VSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr     65 VSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEA    114

BSNT_00740       151 VEDFINKTSPYAQTVTHVIFSEIDTKNGRG    180
                     ||||||||||||||||||||||||||||||
BSU04250___lr    115 VEDFINKTSPYAQTVTHVIFSEIDTKNGRG    144


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