Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00740 and BSU04250

See Amino acid alignment / Visit BSNT_00740 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:06
# Commandline: needle
#    -asequence dna-align/BSNT_00740.1.22522.seq
#    -bsequence dna-align/BSU04250___lrpC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00740-BSU04250___lrpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00740-BSU04250___lrpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00740
# 2: BSU04250___lrpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     432/543 (79.6%)
# Similarity:   432/543 (79.6%)
# Gaps:         108/543 (19.9%)
# Score: 2148.0
# 
#
#=======================================

BSNT_00740         1 ATGTTCGGAAAACATTCATTTTTACATGCCTTTTCTAGGGAACTGTACTT     50
                                                                       
BSU04250___lr      0 --------------------------------------------------      0

BSNT_00740        51 GTCATTTACAAAAATACCCGAGATAATGTGTACAAAATCAAAAAAGAAGG    100
                                                                       
BSU04250___lr      0 --------------------------------------------------      0

BSNT_00740       101 ATGTTGAAATGAAACTTGACCAGATTGATCTGAATATCATTGAGGAGCTG    150
                             ||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr      1 --------ATGAAACTTGACCAGATTGATCTGAATATCATTGAGGAGCTG     42

BSNT_00740       151 AAGAAGGACAGCCGTTTGTCGATGAGGGAATTAGGCAGAAAAATTAAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr     43 AAGAAGGACAGCCGTTTGTCGATGAGGGAATTAGGCAGAAAAATTAAGCT     92

BSNT_00740       201 GTCGCCTCCATCTGTGACAGAACGGGTAAGACAGCTTGAATCGTTTGGCA    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04250___lr     93 GTCGCCTCCATCTGTAACAGAACGGGTAAGACAGCTTGAATCGTTTGGCA    142

BSNT_00740       251 TCATTAAGCAATACACGCTGGAGGTCGACCAGAAAAAACTGGGGCTTCCC    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr    143 TCATCAAGCAATACACGCTGGAGGTCGACCAGAAAAAACTGGGGCTTCCC    192

BSNT_00740       301 GTTTCCTGCATTGTGGAAGCAACCGTTAAAAACGCGGATTACGAGCGGTT    350
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04250___lr    193 GTTTCCTGCATTGTGGAAGCAACCGTTAAAAACGCGGATTATGAGCGGTT    242

BSNT_00740       351 CAAAAGCTATATTCAAACATTGCCGAATATTGAATTTTGCTACCGGATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr    243 CAAAAGCTATATTCAAACATTGCCGAATATTGAATTTTGCTACCGGATTG    292

BSNT_00740       401 CGGGTGCAGCCTGCTATATGCTGAAAATCAATGCCGAAAGCCTCGAAGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr    293 CGGGTGCAGCCTGCTATATGCTGAAAATCAATGCCGAAAGCCTCGAAGCG    342

BSNT_00740       451 GTAGAAGATTTCATTAACAAAACATCGCCCTACGCGCAAACCGTCACTCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr    343 GTAGAAGATTTCATTAACAAAACATCGCCCTACGCGCAAACCGTCACTCA    392

BSNT_00740       501 CGTCATTTTCTCAGAAATTGACACGAAAAACGGGCGCGGTTAG    543
                     |||||||||||||||||||||||||||||||||||||||||||
BSU04250___lr    393 CGTCATTTTCTCAGAAATTGACACGAAAAACGGGCGCGGTTAG    435


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