Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00734 and BSU04190

See DNA alignment / Visit BSNT_00734 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:06
# Commandline: needle
#    -asequence pep-align/BSNT_00734___ydaD.1.22522.seq
#    -bsequence pep-align/BSU04190___ydaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00734___ydaD-BSU04190___ydaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00734___ydaD-BSU04190___ydaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00734___ydaD
# 2: BSU04190___ydaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     285/286 (99.7%)
# Similarity:   285/286 (99.7%)
# Gaps:           0/286 ( 0.0%)
# Score: 1483.0
# 
#
#=======================================

BSNT_00734___      1 MANYPKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd      1 MANYPKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGG     50

BSNT_00734___     51 DSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLIAGD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd     51 DSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLIAGD    100

BSNT_00734___    101 VGEEEFCNEAVGKTVKELGGLDILVNNAGEQHPKESIKDITSEQLHRTFK    150
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04190___yd    101 VGEEEFCNEAVEKTVKELGGLDILVNNAGEQHPKESIKDITSEQLHRTFK    150

BSNT_00734___    151 TNFYSQFYLTKKAIDYLKPGSAIINTTSINPYVGNPTLIDYTATKGAINA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    151 TNFYSQFYLTKKAIDYLKPGSAIINTTSINPYVGNPTLIDYTATKGAINA    200

BSNT_00734___    201 FTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPEETVAQFGQDTPMGRP    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    201 FTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPEETVAQFGQDTPMGRP    250

BSNT_00734___    251 GQPVEHVGCYVLLASDESSYMTGQTLHVNGGNFVTT    286
                     ||||||||||||||||||||||||||||||||||||
BSU04190___yd    251 GQPVEHVGCYVLLASDESSYMTGQTLHVNGGNFVTT    286


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.