Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00734 and BSU04190

See Amino acid alignment / Visit BSNT_00734 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:06
# Commandline: needle
#    -asequence dna-align/BSNT_00734___ydaD.1.22522.seq
#    -bsequence dna-align/BSU04190___ydaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00734___ydaD-BSU04190___ydaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00734___ydaD-BSU04190___ydaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00734___ydaD
# 2: BSU04190___ydaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     858/861 (99.7%)
# Similarity:   858/861 (99.7%)
# Gaps:           0/861 ( 0.0%)
# Score: 4278.0
# 
#
#=======================================

BSNT_00734___      1 ATGGCAAATTATCCAAAAGAACTGCCGGCACAAACTCAAAGTCGCCAGCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd      1 ATGGCAAATTATCCAAAAGAACTGCCGGCACAAACTCAAAGTCGCCAGCC     50

BSNT_00734___     51 GGGAATTGAAAGCGAAATGAATCCAAGTCCGGTGTATGAGTACGAGGATT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd     51 GGGAATTGAAAGCGAAATGAATCCAAGTCCGGTGTATGAGTACGAGGATT    100

BSNT_00734___    101 ATAAAGGAGCAGACAAATTAAAAGGAAAAGTAGCTCTTATTACAGGCGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    101 ATAAAGGAGCAGACAAATTAAAAGGAAAAGTAGCTCTTATTACAGGCGGC    150

BSNT_00734___    151 GACAGCGGGATCGGACGCGCGGTTTCCGTCGCTTACGCAAAGGAAGGCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    151 GACAGCGGGATCGGACGCGCGGTTTCCGTCGCTTACGCAAAGGAAGGCGC    200

BSNT_00734___    201 GGACATCGCCATTGTGTATAAGGATGAGCATGAAGACGCTGAGGAGACGA    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    201 AGACATCGCCATTGTGTATAAGGATGAGCATGAAGACGCTGAGGAGACGA    250

BSNT_00734___    251 AGAAACGTGTTGAACAAGAAGGCGTAAAATGCCTGCTGATTGCTGGTGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    251 AGAAACGTGTTGAACAAGAAGGCGTAAAATGCCTGCTGATTGCTGGTGAC    300

BSNT_00734___    301 GTAGGTGAAGAGGAATTCTGCAATGAAGCGGTTGGAAAAACGGTCAAGGA    350
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU04190___yd    301 GTAGGTGAAGAGGAATTCTGCAATGAAGCGGTTGAAAAAACGGTCAAGGA    350

BSNT_00734___    351 ACTAGGCGGCCTTGACATCCTTGTCAACAATGCAGGTGAACAGCATCCGA    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU04190___yd    351 ACTAGGCGGCCTTGACATCCTTGTCAACAATGCAGGTGAACAGCACCCGA    400

BSNT_00734___    401 AGGAAAGCATCAAAGATATTACGAGCGAACAGCTTCACCGCACATTCAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    401 AGGAAAGCATCAAAGATATTACGAGCGAACAGCTTCACCGCACATTCAAA    450

BSNT_00734___    451 ACAAATTTTTATTCTCAATTTTATTTGACTAAAAAAGCAATTGATTACCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    451 ACAAATTTTTATTCTCAATTTTATTTGACTAAAAAAGCAATTGATTACCT    500

BSNT_00734___    501 GAAACCGGGCAGCGCCATCATCAATACGACATCCATCAACCCGTACGTAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    501 GAAACCGGGCAGCGCCATCATCAATACGACATCCATCAACCCGTACGTAG    550

BSNT_00734___    551 GGAACCCGACACTGATTGATTATACAGCGACAAAAGGGGCGATCAATGCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    551 GGAACCCGACACTGATTGATTATACAGCGACAAAAGGGGCGATCAATGCC    600

BSNT_00734___    601 TTTACAAGAACAATGGCGCAGGCGCTTGTCAAAGACGGCATCCGTGTAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    601 TTTACAAGAACAATGGCGCAGGCGCTTGTCAAAGACGGCATCCGTGTAAA    650

BSNT_00734___    651 TGCAGTCGCGCCGGGTCCAATTTGGACGCCACTAATCCCAGCTACGTTCC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    651 TGCAGTCGCGCCGGGTCCAATTTGGACGCCACTAATCCCAGCTACGTTCC    700

BSNT_00734___    701 CTGAAGAAACAGTTGCTCAATTTGGGCAAGATACGCCGATGGGCCGTCCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    701 CTGAAGAAACAGTTGCTCAATTTGGGCAAGATACGCCGATGGGCCGTCCT    750

BSNT_00734___    751 GGACAGCCTGTTGAGCACGTCGGCTGTTATGTGCTTCTGGCATCAGATGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    751 GGACAGCCTGTTGAGCACGTCGGCTGTTATGTGCTTCTGGCATCAGATGA    800

BSNT_00734___    801 GTCCTCTTACATGACAGGTCAGACCCTGCATGTCAACGGCGGAAACTTTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04190___yd    801 GTCCTCTTACATGACAGGTCAGACCCTGCATGTCAACGGCGGAAACTTTG    850

BSNT_00734___    851 TGACGACATAA    861
                     |||||||||||
BSU04190___yd    851 TGACGACATAA    861


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