Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00602 and BSU03400

See DNA alignment / Visit BSNT_00602 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:50
# Commandline: needle
#    -asequence pep-align/BSNT_00602___yckD.1.22522.seq
#    -bsequence pep-align/BSU03400___yckD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00602___yckD-BSU03400___yckD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00602___yckD-BSU03400___yckD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00602___yckD
# 2: BSU03400___yckD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:     105/110 (95.5%)
# Similarity:   107/110 (97.3%)
# Gaps:           0/110 ( 0.0%)
# Score: 555.0
# 
#
#=======================================

BSNT_00602___      1 MKRITINIITMFIATTVISLTGTAEAAEKQQQPPANVTLTDQQKKEVEQL     50
                     ||||||||||||||..||||||||||||||||.|||||||||||||:|||
BSU03400___yc      1 MKRITINIITMFIAAAVISLTGTAEAAEKQQQSPANVTLTDQQKKEIEQL     50

BSNT_00602___     51 EAEILKKRKDVISKYVQYGVLPKERGEHIKNHLDKHFEMMKQNGFVPKHH    100
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
BSU03400___yc     51 EAEILKKRKDVISKYVQYGILPKERGEHIKNHLDKHFEMMKQNGFVPKHH    100

BSNT_00602___    101 PHPHKFEKRH    110
                     ||||||||||
BSU03400___yc    101 PHPHKFEKRH    110


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