Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00602 and BSU03400

See Amino acid alignment / Visit BSNT_00602 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:50
# Commandline: needle
#    -asequence dna-align/BSNT_00602___yckD.1.22522.seq
#    -bsequence dna-align/BSU03400___yckD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00602___yckD-BSU03400___yckD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00602___yckD-BSU03400___yckD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00602___yckD
# 2: BSU03400___yckD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     323/333 (97.0%)
# Similarity:   323/333 (97.0%)
# Gaps:           0/333 ( 0.0%)
# Score: 1575.0
# 
#
#=======================================

BSNT_00602___      1 ATGAAACGAATAACCATTAACATCATAACAATGTTCATTGCAACGACTGT     50
                     |||||||||||||||||.|||||.||.|||||||||||||||.||.||||
BSU03400___yc      1 ATGAAACGAATAACCATCAACATTATCACAATGTTCATTGCAGCGGCTGT     50

BSNT_00602___     51 CATTTCTCTGACCGGTACAGCTGAGGCCGCTGAAAAACAGCAGCAGCCTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03400___yc     51 CATTTCTCTGACCGGTACAGCTGAGGCCGCTGAAAAACAGCAGCAGTCTC    100

BSNT_00602___    101 CCGCAAATGTTACACTGACAGATCAGCAAAAGAAAGAGGTTGAACAACTG    150
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU03400___yc    101 CCGCAAATGTTACACTGACAGATCAGCAAAAGAAAGAGATTGAACAACTG    150

BSNT_00602___    151 GAAGCAGAGATTCTTAAAAAGCGCAAAGACGTAATCTCAAAGTATGTACA    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU03400___yc    151 GAAGCAGAGATTCTTAAAAAGCGCAAAGACGTGATCTCAAAGTATGTACA    200

BSNT_00602___    201 ATACGGTGTCCTGCCTAAAGAAAGAGGAGAACACATTAAAAATCACTTGG    250
                     |||||||.||||||||||||||||||||||||||||.|||||||||||||
BSU03400___yc    201 ATACGGTATCCTGCCTAAAGAAAGAGGAGAACACATCAAAAATCACTTGG    250

BSNT_00602___    251 ACAAACACTTTGAAATGATGAAACAAAACGGCTTTGTTCCAAAGCACCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03400___yc    251 ACAAACACTTTGAAATGATGAAACAAAACGGCTTTGTTCCAAAGCACCAT    300

BSNT_00602___    301 CCTCATCCGCATAAATTTGAAAAAAGACATTAA    333
                     |||||||||||||||||||||||||||||||||
BSU03400___yc    301 CCTCATCCGCATAAATTTGAAAAAAGACATTAA    333


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