Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00602 and BSU03400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:50
# Commandline: needle
# -asequence dna-align/BSNT_00602___yckD.1.22522.seq
# -bsequence dna-align/BSU03400___yckD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00602___yckD-BSU03400___yckD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00602___yckD-BSU03400___yckD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00602___yckD
# 2: BSU03400___yckD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 323/333 (97.0%)
# Similarity: 323/333 (97.0%)
# Gaps: 0/333 ( 0.0%)
# Score: 1575.0
#
#
#=======================================
BSNT_00602___ 1 ATGAAACGAATAACCATTAACATCATAACAATGTTCATTGCAACGACTGT 50
|||||||||||||||||.|||||.||.|||||||||||||||.||.||||
BSU03400___yc 1 ATGAAACGAATAACCATCAACATTATCACAATGTTCATTGCAGCGGCTGT 50
BSNT_00602___ 51 CATTTCTCTGACCGGTACAGCTGAGGCCGCTGAAAAACAGCAGCAGCCTC 100
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03400___yc 51 CATTTCTCTGACCGGTACAGCTGAGGCCGCTGAAAAACAGCAGCAGTCTC 100
BSNT_00602___ 101 CCGCAAATGTTACACTGACAGATCAGCAAAAGAAAGAGGTTGAACAACTG 150
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU03400___yc 101 CCGCAAATGTTACACTGACAGATCAGCAAAAGAAAGAGATTGAACAACTG 150
BSNT_00602___ 151 GAAGCAGAGATTCTTAAAAAGCGCAAAGACGTAATCTCAAAGTATGTACA 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU03400___yc 151 GAAGCAGAGATTCTTAAAAAGCGCAAAGACGTGATCTCAAAGTATGTACA 200
BSNT_00602___ 201 ATACGGTGTCCTGCCTAAAGAAAGAGGAGAACACATTAAAAATCACTTGG 250
|||||||.||||||||||||||||||||||||||||.|||||||||||||
BSU03400___yc 201 ATACGGTATCCTGCCTAAAGAAAGAGGAGAACACATCAAAAATCACTTGG 250
BSNT_00602___ 251 ACAAACACTTTGAAATGATGAAACAAAACGGCTTTGTTCCAAAGCACCAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03400___yc 251 ACAAACACTTTGAAATGATGAAACAAAACGGCTTTGTTCCAAAGCACCAT 300
BSNT_00602___ 301 CCTCATCCGCATAAATTTGAAAAAAGACATTAA 333
|||||||||||||||||||||||||||||||||
BSU03400___yc 301 CCTCATCCGCATAAATTTGAAAAAAGACATTAA 333
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