Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00589 and BSU03340
See
DNA alignment /
Visit
BSNT_00589 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:49
# Commandline: needle
# -asequence pep-align/BSNT_00589___yciA.1.22522.seq
# -bsequence pep-align/BSU03340___yciA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00589___yciA-BSU03340___yciA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00589___yciA-BSU03340___yciA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00589___yciA
# 2: BSU03340___yciA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 231/319 (72.4%)
# Similarity: 244/319 (76.5%)
# Gaps: 32/319 (10.0%)
# Score: 1101.5
#
#
#=======================================
BSNT_00589___ 1 MNQHTLLPKKTERLQYFGSVSPIKGEKPVEKEKMKDLQNIRKDYFFDIQH 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03340___yc 1 MNQHTLLPKKTERLQYFGSVSPIKGEKPVEKEKMKDLQNIRKDYFFDIQH 50
BSNT_00589___ 51 VGVANVSHPVTITSAMMPAEQTTAANFTMTCNLPRNQKGINMSRLTELLQ 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03340___yc 51 VGVANVSHPVTITSAMMPAEQTTAANFTMTCNLPRNQKGINMSRLTELLQ 100
BSNT_00589___ 101 VYHQNGWILSFSSLQQFTKELAENMDTSPASVEVRFPWFFERKSPKLEKA 150
||||||||||||||||||||||||||||.|:|||||||||||||||||||
BSU03340___yc 101 VYHQNGWILSFSSLQQFTKELAENMDTSSATVEVRFPWFFERKSPKLEKA 150
BSNT_00589___ 151 GLMHADIFMSVTYRKDQPFKQRAGISAKVTTLCPCSKEISEYSAHNQRGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03340___yc 151 GLMHADIFMSVTYRKDQPFKQRAGISAKVTTLCPCSKEISEYSAHNQRGT 200
BSNT_00589___ 201 VSIWADIHPAASLLICLSLNGCRPLRLNAAMKNRSISTMPMRSCVFRRKW 250
||||||||||||| .:..:...|:||..|.|....| |.:|..
BSU03340___yc 201 VSIWADIHPAASL-----PSDVKADLLHAAESNASARLHP----VLKRPD 241
BSNT_00589___ 251 IKYETLIIH----YCSSYASLPAVNLLR---------TCRRTRKYQYKEN 287
.|..|...: :....|.|.|.:|.. .||. :|:
BSU03340___yc 242 EKAVTETAYENPRFVEDLARLIAADLFELEWVSAFEIECRN------EES 285
BSNT_00589___ 288 GRKHNGRSKNSKNKH---- 302
...|:..:|...:|.
BSU03340___yc 286 IHLHDAYAKLCFSKEVDKI 304
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.