Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00575 and BSU03260

See DNA alignment / Visit BSNT_00575 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:46
# Commandline: needle
#    -asequence pep-align/BSNT_00575___ycgS.1.22522.seq
#    -bsequence pep-align/BSU03260___ycgS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00575___ycgS-BSU03260___ycgS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00575___ycgS-BSU03260___ycgS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00575___ycgS
# 2: BSU03260___ycgS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     260/284 (91.5%)
# Similarity:   262/284 (92.3%)
# Gaps:          15/284 ( 5.3%)
# Score: 1368.0
# 
#
#=======================================

BSNT_00575___      1 MKRRVETITFEGHTLEYSVAGKGAPILFMHGGHSNCYEEFGYTALIEQGY     50
                     ||||||||||:|.||||||.|||.|||.||||||||||||||||||||||
BSU03260___yc      1 MKRRVETITFDGGTLEYSVTGKGTPILVMHGGHSNCYEEFGYTALIEQGY     50

BSNT_00575___     51 SIITPSRPGYGRTSKEIGKSLANACRFYVKLLDHLQIDSVHVIAISAGGP    100
                     |||||||||||||||||||||||||||||||||||||:||||||||||||
BSU03260___yc     51 SIITPSRPGYGRTSKEIGKSLANACRFYVKLLDHLQIESVHVIAISAGGP    100

BSNT_00575___    101 SGICFASHYPERVNTLTLQSAVTKEWLTPKDTEYKLGRILFRPPVENWIW    150
                     |||||||||||||||||||||||||||||||||||||.||||||||.|||
BSU03260___yc    101 SGICFASHYPERVNTLTLQSAVTKEWLTPKDTEYKLGEILFRPPVEKWIW    150

BSNT_00575___    151 KLISSLNNAFPRLMFRAMSPQFSTLPFQRIKSLMNEKDIEAFRKMNSRQR    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    151 KLISSLNNAFPRLMFRAMSPQFSTLPFQRIKSLMNEKDIEAFRKMNSRQR    200

BSNT_00575___    201 SSEGFLIDLSQTAAVSLKDLQAIICPVLIMQSVYDGLVDLSHAHHAKEHI    250
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    201 SGEGFLIDLSQTAAVSLKDLQAIICPVLIMQSVYDGLVDLSHAHHAKEHI    250

BSNT_00575___    251 RGAVLCLLHSWGHLIWLGK---------------    269
                     |||||||||||||||||||               
BSU03260___yc    251 RGAVLCLLHSWGHLIWLGKEAAETGSILLGFLES    284


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