Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00575 and BSU03260

See Amino acid alignment / Visit BSNT_00575 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:46
# Commandline: needle
#    -asequence dna-align/BSNT_00575___ycgS.1.22522.seq
#    -bsequence dna-align/BSU03260___ycgS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00575___ycgS-BSU03260___ycgS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00575___ycgS-BSU03260___ycgS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00575___ycgS
# 2: BSU03260___ycgS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 855
# Identity:     782/855 (91.5%)
# Similarity:   782/855 (91.5%)
# Gaps:          45/855 ( 5.3%)
# Score: 3798.0
# 
#
#=======================================

BSNT_00575___      1 ATGAAAAGACGAGTCGAAACGATCACCTTCGAAGGACATACACTAGAATA     50
                     ||||||||||||||.|||||||||||||||||.||...||||||||||||
BSU03260___yc      1 ATGAAAAGACGAGTTGAAACGATCACCTTCGATGGCGGTACACTAGAATA     50

BSNT_00575___     51 TTCAGTGGCTGGAAAGGGTGCCCCCATCCTTTTCATGCATGGCGGCCATT    100
                     |||.|||.|.||.|||||..|.||.||||||.|||||||||||||.||||
BSU03260___yc     51 TTCTGTGACAGGCAAGGGAACTCCGATCCTTGTCATGCATGGCGGGCATT    100

BSNT_00575___    101 CAAATTGTTACGAGGAATTCGGATACACAGCGTTGATTGAGCAAGGGTAT    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU03260___yc    101 CAAATTGTTACGAGGAATTCGGATACACAGCGTTGATTGAACAAGGGTAT    150

BSNT_00575___    151 TCCATCATTACGCCTTCAAGGCCCGGCTATGGACGAACGTCAAAAGAAAT    200
                     |||||||||||||||||||||||.|||||||||||.||||||||||||||
BSU03260___yc    151 TCCATCATTACGCCTTCAAGGCCTGGCTATGGACGGACGTCAAAAGAAAT    200

BSNT_00575___    201 TGGAAAAAGTCTTGCCAACGCCTGCCGTTTCTATGTGAAATTATTAGATC    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU03260___yc    201 TGGAAAAAGTCTTGCCAATGCCTGCCGTTTCTATGTGAAATTATTAGATC    250

BSNT_00575___    251 ATCTACAAATCGACAGTGTCCATGTGATCGCCATCTCAGCAGGAGGGCCG    300
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU03260___yc    251 ATCTACAAATCGAGAGTGTCCATGTGATCGCCATCTCAGCAGGAGGGCCG    300

BSNT_00575___    301 AGCGGCATATGCTTTGCCTCACATTATCCGGAAAGAGTAAATACATTGAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    301 AGCGGCATATGCTTTGCCTCACATTATCCGGAAAGAGTAAATACATTGAC    350

BSNT_00575___    351 CCTGCAATCCGCGGTCACCAAAGAGTGGCTCACCCCAAAAGACACTGAAT    400
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03260___yc    351 CCTGCAATCCGCAGTCACCAAAGAGTGGCTCACCCCAAAAGACACTGAAT    400

BSNT_00575___    401 ATAAATTGGGGAGAATTCTCTTCCGCCCGCCGGTGGAAAATTGGATATGG    450
                     |||||||||||..|||||||||||||||||||||||||||.|||||||||
BSU03260___yc    401 ATAAATTGGGGGAAATTCTCTTCCGCCCGCCGGTGGAAAAGTGGATATGG    450

BSNT_00575___    451 AAGCTGATTTCTTCTTTGAATAACGCTTTCCCGCGTTTGATGTTTCGAGC    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU03260___yc    451 AAGCTGATTTCTTCCTTGAATAACGCTTTCCCGCGTTTGATGTTTCGAGC    500

BSNT_00575___    501 TATGAGCCCCCAATTCAGCACGCTTCCGTTTCAGCGAATCAAGTCCTTGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    501 TATGAGCCCCCAATTCAGCACGCTTCCGTTTCAGCGAATCAAGTCCTTGA    550

BSNT_00575___    551 TGAATGAAAAAGACATAGAAGCATTTCGGAAAATGAACAGCCGGCAGCGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    551 TGAATGAAAAAGACATAGAAGCATTTCGGAAAATGAACAGCCGGCAGCGC    600

BSNT_00575___    601 TCGAGTGAAGGATTTCTGATTGACTTGTCACAAACCGCCGCTGTCTCTTT    650
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    601 TCGGGTGAAGGATTTCTGATTGACTTGTCACAAACCGCCGCTGTCTCTTT    650

BSNT_00575___    651 AAAAGACCTGCAAGCCATCATATGTCCCGTGCTGATTATGCAAAGTGTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    651 AAAAGACCTGCAAGCCATCATATGTCCCGTGCTGATTATGCAAAGTGTTT    700

BSNT_00575___    701 ATGATGGATTGGTTGACTTGTCACATGCACATCATGCAAAAGAGCACATT    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    701 ATGACGGATTGGTTGACTTGTCACATGCACATCATGCAAAAGAGCACATT    750

BSNT_00575___    751 CGTGGCGCTGTTCTCTGTTTGCTTCACTCATGGGGACACCTGATTTGGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03260___yc    751 CGTGGCGCTGTTCTCTGTTTGCTTCACTCATGGGGACACCTGATTTGGCT    800

BSNT_00575___    801 CGGAAAATAA----------------------------------------    810
                     |||||||.||                                        
BSU03260___yc    801 CGGAAAAGAAGCTGCAGAAACAGGCAGTATCCTACTCGGCTTTTTGGAAT    850

BSNT_00575___    810 -----    810
                          
BSU03260___yc    851 CCTAA    855


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