Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00556 and BSU03140
See
DNA alignment /
Visit
BSNT_00556 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:44
# Commandline: needle
# -asequence pep-align/BSNT_00556___tmrB.1.22522.seq
# -bsequence pep-align/BSU03140___tmrB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00556___tmrB-BSU03140___tmrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00556___tmrB-BSU03140___tmrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00556___tmrB
# 2: BSU03140___tmrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 196/197 (99.5%)
# Similarity: 197/197 (100.0%)
# Gaps: 0/197 ( 0.0%)
# Score: 1016.0
#
#
#=======================================
BSNT_00556___ 1 MIIWINGAFGSGKTQTAFELHRRLSPSYVYDPEKMGFALRSMVPQEIAKD 50
||||||||||||||||||||||||:|||||||||||||||||||||||||
BSU03140___tm 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKD 50
BSNT_00556___ 51 DFQSYPLWRAFNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm 51 DFQSYPLWRAFNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEG 100
BSNT_00556___ 101 RIVHHFTLMASKETLLKRLRTRAEGKNSWAAKQIDRCVEGLSSPIFEDHI 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm 101 RIVHHFTLMASKETLLKRLRTRAEGKNSWAAKQIDRCVEGLSSPIFEDHI 150
BSNT_00556___ 151 QTDNLSIQDVAENIAARAELPLDPDTRGSLRRFADRLMVKLNHIRIK 197
|||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm 151 QTDNLSIQDVAENIAARAELPLDPDTRGSLRRFADRLMVKLNHIRIK 197
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.