Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00556 and BSU03140

See Amino acid alignment / Visit BSNT_00556 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:44
# Commandline: needle
#    -asequence dna-align/BSNT_00556___tmrB.1.22522.seq
#    -bsequence dna-align/BSU03140___tmrB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00556___tmrB-BSU03140___tmrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00556___tmrB-BSU03140___tmrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00556___tmrB
# 2: BSU03140___tmrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     593/594 (99.8%)
# Similarity:   593/594 (99.8%)
# Gaps:           0/594 ( 0.0%)
# Score: 2961.0
# 
#
#=======================================

BSNT_00556___      1 ATGATCATTTGGATAAACGGGGCATTCGGTTCGGGAAAAACACAAACAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm      1 ATGATCATTTGGATAAACGGGGCATTCGGTTCGGGAAAAACACAAACAGC     50

BSNT_00556___     51 CTTCGAACTGCACAGAAGGCTGAGCCCATCTTACGTGTATGATCCCGAGA    100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU03140___tm     51 CTTCGAACTGCACAGAAGGCTGAACCCATCTTACGTGTATGATCCCGAGA    100

BSNT_00556___    101 AAATGGGTTTTGCGCTGCGCTCCATGGTGCCGCAGGAGATCGCAAAGGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    101 AAATGGGTTTTGCGCTGCGCTCCATGGTGCCGCAGGAGATCGCAAAGGAC    150

BSNT_00556___    151 GATTTTCAAAGCTATCCTTTATGGCGGGCGTTCAATTACAGTTTGCTAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    151 GATTTTCAAAGCTATCCTTTATGGCGGGCGTTCAATTACAGTTTGCTAGC    200

BSNT_00556___    201 TTCTCTGACAGATACATACCGCGGCATCCTTATTGTGCCTATGACGATTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    201 TTCTCTGACAGATACATACCGCGGCATCCTTATTGTGCCTATGACGATTG    250

BSNT_00556___    251 TACACCCTGAATACTTCAATGAGATCATCGGCAGGCTCAGACAGGAAGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    251 TACACCCTGAATACTTCAATGAGATCATCGGCAGGCTCAGACAGGAAGGC    300

BSNT_00556___    301 AGGATCGTTCACCACTTTACACTAATGGCTTCAAAGGAAACCTTGTTAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    301 AGGATCGTTCACCACTTTACACTAATGGCTTCAAAGGAAACCTTGTTAAA    350

BSNT_00556___    351 AAGGCTGCGCACCAGAGCAGAAGGAAAAAACTCATGGGCCGCCAAACAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    351 AAGGCTGCGCACCAGAGCAGAAGGAAAAAACTCATGGGCCGCCAAACAAA    400

BSNT_00556___    401 TTGACCGCTGTGTTGAAGGATTATCATCACCCATTTTTGAGGACCACATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    401 TTGACCGCTGTGTTGAAGGATTATCATCACCCATTTTTGAGGACCACATT    450

BSNT_00556___    451 CAAACAGACAACCTGTCGATTCAGGATGTGGCAGAGAACATTGCCGCGAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    451 CAAACAGACAACCTGTCGATTCAGGATGTGGCAGAGAACATTGCCGCGAG    500

BSNT_00556___    501 AGCCGAACTCCCATTAGATCCTGATACAAGAGGCAGCCTCCGAAGGTTCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    501 AGCCGAACTCCCATTAGATCCTGATACAAGAGGCAGCCTCCGAAGGTTCG    550

BSNT_00556___    551 CCGACAGATTAATGGTAAAGCTGAATCATATCCGCATCAAATAA    594
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU03140___tm    551 CCGACAGATTAATGGTAAAGCTGAATCATATCCGCATCAAATAA    594


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