Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00547 and BSU03110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:44
# Commandline: needle
# -asequence pep-align/BSNT_00547.1.22522.seq
# -bsequence pep-align/BSU03110___ycgH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00547-BSU03110___ycgH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00547-BSU03110___ycgH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00547
# 2: BSU03110___ycgH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 154/454 (33.9%)
# Similarity: 157/454 (34.6%)
# Gaps: 295/454 (65.0%)
# Score: 758.5
#
#
#=======================================
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 1 MSQTKKDQPKGNLAWWQLSLIGVGCTIGTGFFLGSSIAIVKSGFSVLLSF 50
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 51 LIAGIGTYFVFEQLAKLSAKQPEKGSFCAYARKAFGKWAGFSNGWVYWTS 100
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 101 EMLITGSQLTAISLFTKHWFPQVPLWVFASIYAVLGLLIIFTGLSVFEKT 150
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 151 ENVLAVIKTAAIFMFIVIAILALCGILSGGNHGIHVPNKTSEFFPYGAMG 200
BSNT_00547 1 -------------------------------------MLATLAIIYIISI 13
|||||||||||||
BSU03110___yc 201 LWTGLIYAFYAFGGIEVMGLMAVHLKKPEEASKSGKLMLATLAIIYIISI 250
BSNT_00547 14 GLALLLVPLHAFTEQDSPFITSLKGYNLEIILDIFNGIFIIAGFSTLVAS 63
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU03110___yc 251 GLALLLVPLHTFTEQDSPFITSLKGYNLEIILDIFNGIFIIAGFSTLVAS 300
BSNT_00547 64 LFAVTTLLCTMADDGDAPKCFTLKEGKKICWPAL-LTFAGLVLSIILSLV 112
|||||||||||||||||||||||||||||||||| |||||||||||||||
BSU03110___yc 301 LFAVTTLLCTMADDGDAPKCFTLKEGKKICWPALGLTFAGLVLSIILSLV 350
BSNT_00547 113 LPKNIYEHMTTAAGLMLLYTWLFIMFSSKKLTDPEGMGKTQIYCSDCCGC 162
||||||||||||||||||||||||:||||||||||||||||||.:
BSU03110___yc 351 LPKNIYEHMTTAAGLMLLYTWLFILFSSKKLTDPEGMGKTQIYLA----- 395
BSNT_00547 163 VRYIV--------------------------------------------- 167
:|
BSU03110___yc 396 ---MVLIAAAVSGTLFEKSSRPGFFVSIGFLVIIAIVTMIYQKKQGHKDR 442
BSNT_00547 167 ---- 167
BSU03110___yc 443 PASP 446
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