Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00547 and BSU03110

See DNA alignment / Visit BSNT_00547 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:44
# Commandline: needle
#    -asequence pep-align/BSNT_00547.1.22522.seq
#    -bsequence pep-align/BSU03110___ycgH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00547-BSU03110___ycgH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00547-BSU03110___ycgH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00547
# 2: BSU03110___ycgH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity:     154/454 (33.9%)
# Similarity:   157/454 (34.6%)
# Gaps:         295/454 (65.0%)
# Score: 758.5
# 
#
#=======================================

BSNT_00547         0 --------------------------------------------------      0
                                                                       
BSU03110___yc      1 MSQTKKDQPKGNLAWWQLSLIGVGCTIGTGFFLGSSIAIVKSGFSVLLSF     50

BSNT_00547         0 --------------------------------------------------      0
                                                                       
BSU03110___yc     51 LIAGIGTYFVFEQLAKLSAKQPEKGSFCAYARKAFGKWAGFSNGWVYWTS    100

BSNT_00547         0 --------------------------------------------------      0
                                                                       
BSU03110___yc    101 EMLITGSQLTAISLFTKHWFPQVPLWVFASIYAVLGLLIIFTGLSVFEKT    150

BSNT_00547         0 --------------------------------------------------      0
                                                                       
BSU03110___yc    151 ENVLAVIKTAAIFMFIVIAILALCGILSGGNHGIHVPNKTSEFFPYGAMG    200

BSNT_00547         1 -------------------------------------MLATLAIIYIISI     13
                                                          |||||||||||||
BSU03110___yc    201 LWTGLIYAFYAFGGIEVMGLMAVHLKKPEEASKSGKLMLATLAIIYIISI    250

BSNT_00547        14 GLALLLVPLHAFTEQDSPFITSLKGYNLEIILDIFNGIFIIAGFSTLVAS     63
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU03110___yc    251 GLALLLVPLHTFTEQDSPFITSLKGYNLEIILDIFNGIFIIAGFSTLVAS    300

BSNT_00547        64 LFAVTTLLCTMADDGDAPKCFTLKEGKKICWPAL-LTFAGLVLSIILSLV    112
                     |||||||||||||||||||||||||||||||||| |||||||||||||||
BSU03110___yc    301 LFAVTTLLCTMADDGDAPKCFTLKEGKKICWPALGLTFAGLVLSIILSLV    350

BSNT_00547       113 LPKNIYEHMTTAAGLMLLYTWLFIMFSSKKLTDPEGMGKTQIYCSDCCGC    162
                     ||||||||||||||||||||||||:||||||||||||||||||.:     
BSU03110___yc    351 LPKNIYEHMTTAAGLMLLYTWLFILFSSKKLTDPEGMGKTQIYLA-----    395

BSNT_00547       163 VRYIV---------------------------------------------    167
                        :|                                             
BSU03110___yc    396 ---MVLIAAAVSGTLFEKSSRPGFFVSIGFLVIIAIVTMIYQKKQGHKDR    442

BSNT_00547       167 ----    167
                         
BSU03110___yc    443 PASP    446


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