Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00547 and BSU03110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:44
# Commandline: needle
# -asequence dna-align/BSNT_00547.1.22522.seq
# -bsequence dna-align/BSU03110___ycgH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00547-BSU03110___ycgH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00547-BSU03110___ycgH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00547
# 2: BSU03110___ycgH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1341
# Identity: 496/1341 (37.0%)
# Similarity: 496/1341 (37.0%)
# Gaps: 837/1341 (62.4%)
# Score: 2423.5
#
#
#=======================================
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 1 ATGAGCCAAACAAAAAAAGACCAGCCAAAAGGGAATCTGGCTTGGTGGCA 50
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 51 GCTGTCACTGATCGGAGTCGGCTGCACGATTGGAACAGGCTTCTTTCTCG 100
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 101 GTTCCAGCATCGCAATTGTAAAAAGCGGTTTTTCCGTTCTCCTTTCATTT 150
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 151 CTGATCGCAGGGATCGGTACGTATTTTGTCTTTGAACAGCTCGCCAAGCT 200
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 201 ATCGGCGAAGCAGCCGGAAAAGGGCTCGTTTTGTGCGTATGCCCGAAAAG 250
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 251 CATTCGGCAAATGGGCAGGCTTCAGCAACGGCTGGGTGTACTGGACATCA 300
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 301 GAAATGCTGATTACCGGAAGCCAGCTGACAGCCATTTCGCTCTTTACGAA 350
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 351 GCATTGGTTTCCTCAAGTGCCGCTATGGGTGTTTGCCTCAATCTACGCAG 400
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 401 TACTTGGGCTCCTTATTATTTTCACCGGCCTGTCCGTCTTTGAAAAAACA 450
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 451 GAAAACGTGCTGGCAGTCATTAAAACAGCTGCTATTTTTATGTTTATTGT 500
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 501 CATTGCCATCCTGGCTTTATGCGGTATCCTGTCCGGCGGAAATCATGGCA 550
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 551 TACATGTTCCAAATAAGACGAGTGAGTTTTTCCCATACGGCGCCATGGGG 600
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 601 CTGTGGACAGGTTTAATCTACGCGTTTTACGCTTTTGGCGGAATTGAGGT 650
BSNT_00547 0 -------------------------------------------------- 0
BSU03110___yc 651 CATGGGGCTGATGGCGGTTCACTTAAAAAAACCTGAGGAAGCGTCTAAAT 700
BSNT_00547 1 -----------ATGCTGGCGACGCTGGCGATTATTTATATCATTTCAATC 39
|||||||||||||||||||||||||||||||||||||||
BSU03110___yc 701 CAGGGAAACTGATGCTGGCGACGCTGGCGATTATTTATATCATTTCAATC 750
BSNT_00547 40 GGGCTTGCTCTGCTTTTGGTTCCGTTACACGCGTTTACTGAACAGGACAG 89
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU03110___yc 751 GGGCTTGCTCTGCTTTTGGTTCCGTTACACACGTTTACTGAACAGGACAG 800
BSNT_00547 90 TCCGTTCATTACATCATTAAAAGGATATAACCTTGAGATCATCCTTGATA 139
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03110___yc 801 TCCGTTCATTACGTCATTAAAAGGATATAACCTTGAGATCATCCTTGATA 850
BSNT_00547 140 TATTTAACGGGATTTTCATCATCGCCGGGTTCTCGACCCTTGTCGCTTCG 189
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03110___yc 851 TATTTAACGGGATTTTCATCATCGCAGGGTTCTCGACCCTTGTCGCTTCG 900
BSNT_00547 190 CTTTTTGCCGTTACGACATTGCTTTGTACAATGGCTGATGACGGCGACGC 239
||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU03110___yc 901 CTATTTGCGGTTACGACATTGCTTTGTACAATGGCTGATGACGGCGACGC 950
BSNT_00547 240 GCCGAAATGCTTTACTCTAAAGGAAGGCAAAAAAATATGCTGGCCGGCAC 289
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03110___yc 951 GCCGAAATGCTTTACTCTAAAGGAAGGCAAAAAAATATGCTGGCCGGCAC 1000
BSNT_00547 290 TT---CTGACGTTTGCGGGGCTTGTCCTCTCCATTATTCTGTCGTTAGTG 336
|| |||||||||||||||||||||||||||||||||.|||||||||||
BSU03110___yc 1001 TTGGGCTGACGTTTGCGGGGCTTGTCCTCTCCATTATTTTGTCGTTAGTG 1050
BSNT_00547 337 CTGCCTAAAAACATTTATGAGCATATGACAACAGCTGCGGGGCTTATGCT 386
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03110___yc 1051 CTGCCTAAAAACATTTATGAGCATATGACAACAGCTGCGGGGCTTATGCT 1100
BSNT_00547 387 TTTATACACTTGGCTGTTTATCATGTTCTCCAGCAAAAAGCTGACTGATC 436
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU03110___yc 1101 TTTATACACTTGGCTGTTTATCCTGTTCTCCAGCAAAAAGCTGACTGATC 1150
BSNT_00547 437 CCGAGGGCATGGGAAAAACGCAAATTTATT--------GTTCTGATTGCT 478
|||||||||||||||||||||||||||||| ||||||||||||
BSU03110___yc 1151 CCGAGGGCATGGGAAAAACGCAAATTTATTTAGCGATGGTTCTGATTGCT 1200
BSNT_00547 479 GCGGCTGTGTCCGGTACATTGTTTGA------------------------ 504
||.|||||||||||||||||||||||
BSU03110___yc 1201 GCAGCTGTGTCCGGTACATTGTTTGAAAAATCAAGCCGGCCCGGTTTTTT 1250
BSNT_00547 504 -------------------------------------------------- 504
BSU03110___yc 1251 CGTCAGCATAGGTTTTCTCGTGATTATCGCCATCGTTACCATGATCTATC 1300
BSNT_00547 504 ----------------------------------------- 504
BSU03110___yc 1301 AAAAAAAGCAGGGTCATAAAGATCGCCCTGCCAGTCCTTGA 1341
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