Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00541 and BSU03050

See DNA alignment / Visit BSNT_00541 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:43
# Commandline: needle
#    -asequence pep-align/BSNT_00541___ldh.1.22522.seq
#    -bsequence pep-align/BSU03050___ldh.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00541___ldh-BSU03050___ldh.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00541___ldh-BSU03050___ldh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00541___ldh
# 2: BSU03050___ldh
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     320/321 (99.7%)
# Similarity:   321/321 (100.0%)
# Gaps:           0/321 ( 0.0%)
# Score: 1657.0
# 
#
#=======================================

BSNT_00541___      1 MMNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld      1 MMNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMD     50

BSNT_00541___     51 LNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld     51 LNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNL    100

BSNT_00541___    101 KIFKGIVSEVMASGFDGIFLIATNPVDILTYATWKFSGLPKERVIGSGTT    150
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
BSU03050___ld    101 KIFKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTT    150

BSNT_00541___    151 LDSARFRFMLSEYFGAAPQNVHAHIIGEHGDTELPVWSHANVGGVPVSEL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    151 LDSARFRFMLSEYFGAAPQNVHAHIIGEHGDTELPVWSHANVGGVPVSEL    200

BSNT_00541___    201 VEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLARITKAILH    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    201 VEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLARITKAILH    250

BSNT_00541___    251 NENSILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITELNLNEKEKEQF    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    251 NENSILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITELNLNEKEKEQF    300

BSNT_00541___    301 LHSAGVLKNILKPHFAEQKVN    321
                     |||||||||||||||||||||
BSU03050___ld    301 LHSAGVLKNILKPHFAEQKVN    321


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