Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00541 and BSU03050

See Amino acid alignment / Visit BSNT_00541 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:43
# Commandline: needle
#    -asequence dna-align/BSNT_00541___ldh.1.22522.seq
#    -bsequence dna-align/BSU03050___ldh.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00541___ldh-BSU03050___ldh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00541___ldh-BSU03050___ldh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00541___ldh
# 2: BSU03050___ldh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 966
# Identity:     958/966 (99.2%)
# Similarity:   958/966 (99.2%)
# Gaps:           0/966 ( 0.0%)
# Score: 4758.0
# 
#
#=======================================

BSNT_00541___      1 ATGATGAACAAACATGTAAATAAAGTAGCTTTAATCGGAGCGGGTTTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld      1 ATGATGAACAAACATGTAAATAAAGTAGCTTTAATCGGAGCGGGTTTTGT     50

BSNT_00541___     51 TGGAAGCAGTTATGCATTTGCGTTAATTAACCAAGGGATCACAGATGAGC    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU03050___ld     51 TGGAAGCAGTTATGCATTTGCGTTAATTAACCAAGGAATCACAGATGAGC    100

BSNT_00541___    101 TTGTGGTCATTGATGTAAATAAAGAAAAAGCAATGGGCGATGTGATGGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    101 TTGTGGTCATTGATGTAAATAAAGAAAAAGCAATGGGCGATGTGATGGAT    150

BSNT_00541___    151 TTAAACCACGGAAAGGCGTTTGCGCCACAACCGGTCAAAACATCTTACGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    151 TTAAACCACGGAAAGGCGTTTGCGCCACAACCGGTCAAAACATCTTACGG    200

BSNT_00541___    201 AACATATGAAGACTGCAAGGATGCTGATATTGTCTGCATTTGCGCCGGAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    201 AACATATGAAGACTGCAAGGATGCTGATATTGTCTGCATTTGCGCCGGAG    250

BSNT_00541___    251 CAAACCAAAAACCTGGTGAGACACGCCTTGAATTAGTAGAAAAGAACTTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    251 CAAACCAAAAACCTGGTGAGACACGCCTTGAATTAGTAGAAAAGAACTTG    300

BSNT_00541___    301 AAGATTTTCAAAGGCATCGTCAGTGAGGTCATGGCGAGCGGATTTGACGG    350
                     ||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU03050___ld    301 AAGATTTTCAAAGGCATCGTTAGTGAAGTCATGGCGAGCGGATTTGACGG    350

BSNT_00541___    351 CATTTTCTTAATCGCGACAAATCCGGTTGATATCCTGACTTACGCAACAT    400
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU03050___ld    351 CATTTTCTTAGTCGCGACAAATCCGGTTGATATCCTGACTTACGCAACAT    400

BSNT_00541___    401 GGAAATTTAGCGGCCTGCCAAAAGAGCGGGTGATCGGAAGCGGCACAACA    450
                     |||||||.||||||||||||||||||||||||||.|||||||||||||||
BSU03050___ld    401 GGAAATTCAGCGGCCTGCCAAAAGAGCGGGTGATTGGAAGCGGCACAACA    450

BSNT_00541___    451 CTAGATTCTGCGAGATTCCGTTTCATGCTGAGCGAATACTTTGGCGCAGC    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    451 CTTGATTCTGCGAGATTCCGTTTCATGCTGAGCGAATACTTTGGCGCAGC    500

BSNT_00541___    501 GCCTCAAAACGTACACGCGCATATTATCGGAGAGCACGGCGACACAGAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    501 GCCTCAAAACGTACACGCGCATATTATCGGAGAGCACGGCGACACAGAGC    550

BSNT_00541___    551 TTCCTGTTTGGAGCCACGCGAATGTCGGCGGTGTGCCGGTCAGTGAACTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    551 TTCCTGTTTGGAGCCACGCGAATGTCGGCGGTGTGCCGGTCAGTGAACTC    600

BSNT_00541___    601 GTTGAGAAAAACGATGCGTACAAACAAGAGGAGCTGGACCAAATTGTAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    601 GTTGAGAAAAACGATGCGTACAAACAAGAGGAGCTGGACCAAATTGTAGA    650

BSNT_00541___    651 TGATGTGAAAAACGCAGCTTACCATATCATTGAGAAAAAAGGCGCGACTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    651 TGATGTGAAAAACGCAGCTTACCATATCATTGAGAAAAAAGGCGCGACTT    700

BSNT_00541___    701 ATTATGGGGTTGCGATGAGTCTTGCTCGCATTACAAAAGCCATTCTTCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    701 ATTATGGGGTTGCGATGAGTCTTGCTCGCATTACAAAAGCCATTCTTCAT    750

BSNT_00541___    751 AATGAAAACAGCATATTAACTGTCAGCACATATTTGGACGGGCAATACGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    751 AATGAAAACAGCATATTAACTGTCAGCACATATTTGGACGGGCAATACGG    800

BSNT_00541___    801 TGCAGATGACGTGTACATCGGTGTGCCGGCTGTCGTGAACCGCGGAGGGA    850
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU03050___ld    801 TGCAGATGACGTGTACATCGGTGTGCCGGCTGTCGTGAATCGCGGAGGGA    850

BSNT_00541___    851 TCGCAGGTATCACTGAGCTGAACTTAAATGAGAAAGAAAAAGAACAGTTC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    851 TCGCAGGTATCACTGAGCTGAACTTAAATGAGAAAGAAAAAGAACAGTTC    900

BSNT_00541___    901 CTTCACAGCGCCGGCGTCCTTAAAAACATTTTAAAACCTCATTTTGCAGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03050___ld    901 CTTCACAGCGCCGGCGTCCTTAAAAACATTTTAAAACCTCATTTTGCAGA    950

BSNT_00541___    951 ACAAAAAGTCAACTAA    966
                     ||||||||||||||||
BSU03050___ld    951 ACAAAAAGTCAACTAA    966


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