Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00538 and BSU03040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:43
# Commandline: needle
# -asequence pep-align/BSNT_00538.1.22522.seq
# -bsequence pep-align/BSU03040___amyE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00538-BSU03040___amyE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00538-BSU03040___amyE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00538
# 2: BSU03040___amyE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 659
# Identity: 465/659 (70.6%)
# Similarity: 469/659 (71.2%)
# Gaps: 182/659 (27.6%)
# Score: 2450.0
#
#
#=======================================
BSNT_00538 1 MFAKRFKTSLLPLFAGFLLLFYLVLAGPAAASAETANKSNELTAPSIKSG 50
|||||||||||||||||||||:||||||||||||||||||||||||||||
BSU03040___am 1 MFAKRFKTSLLPLFAGFLLLFHLVLAGPAAASAETANKSNELTAPSIKSG 50
BSNT_00538 51 TILHAWNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWY 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 51 TILHAWNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWY 100
BSNT_00538 101 WLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTTSDYAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 101 WLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTTSDYAA 150
BSNT_00538 151 ISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLPGLYDWNTQNTQVQSYLK 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU03040___am 151 ISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLK 200
BSNT_00538 201 RFLERALNDGADGFRFDAAKHIELPDDGSYGSQFWPNITNTSAEFQYGEI 250
|||:||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 201 RFLDRALNDGADGFRFDAAKHIELPDDGSYGSQFWPNITNTSAEFQYGEI 250
BSNT_00538 251 LQDSASRDAAYANYMDVTASNYGHSIRSALKNRNLGVSNISHYASDVSAD 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 251 LQDSASRDAAYANYMDVTASNYGHSIRSALKNRNLGVSNISHYASDVSAD 300
BSNT_00538 301 KLVTWVESHDTYANDDEESTWMSDDDIRLGWAVIASRSGSTPLFFSRPEG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 301 KLVTWVESHDTYANDDEESTWMSDDDIRLGWAVIASRSGSTPLFFSRPEG 350
BSNT_00538 351 GGNGVRFPGKSQIGDRGSALFEDQAITAVNRFHNVMAGQHEELSNPNGNN 400
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU03040___am 351 GGNGVRFPGKSQIGDRGSALFEDQAITAVNRFHNVMAGQPEELSNPNGNN 400
BSNT_00538 401 QIFMNQRGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQVNDGK 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 401 QIFMNQRGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQVNDGK 450
BSNT_00538 451 LTGTINARSVAVLYPDDIEIRCNTFFQ----------------------- 477
||||||||||||||||||....:.|.:
BSU03040___am 451 LTGTINARSVAVLYPDDIAKAPHVFLENYKTGVTHSFNDQLTITLRADAN 500
BSNT_00538 477 -------------------------------------------------- 477
BSU03040___am 501 TTKAVYQINNGPETAFKDGDQFTIGKGDPFGKTYTIMLKGTNSDGVTRTE 550
BSNT_00538 477 -------------------------------------------------- 477
BSU03040___am 551 KYSFVKRDPASAKTIGYQNPNHWSQVNAYIYKHDGSRVIELTGSWPGKPM 600
BSNT_00538 477 -------------------------------------------------- 477
BSU03040___am 601 TKNADGIYTLTLPADTDTTNAKVIFNNGSAQVPGQNQPGFDYVLNGLYND 650
BSNT_00538 477 --------- 477
BSU03040___am 651 SGLSGSLPH 659
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