Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00538 and BSU03040
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:43
# Commandline: needle
# -asequence dna-align/BSNT_00538.1.22522.seq
# -bsequence dna-align/BSU03040___amyE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00538-BSU03040___amyE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00538-BSU03040___amyE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00538
# 2: BSU03040___amyE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1980
# Identity: 1424/1980 (71.9%)
# Similarity: 1424/1980 (71.9%)
# Gaps: 546/1980 (27.6%)
# Score: 7054.5
#
#
#=======================================
BSNT_00538 1 ATGTTTGCAAAACGATTCAAAACCTCTTTACTGCCGTTATTCGCTGGATT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1 ATGTTTGCAAAACGATTCAAAACCTCTTTACTGCCGTTATTCGCTGGATT 50
BSNT_00538 51 TTTATTGCTGTTTTATTTGGTTCTGGCAGGACCGGCGGCTGCGAGTGCTG 100
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU03040___am 51 TTTATTGCTGTTTCATTTGGTTCTGGCAGGACCGGCGGCTGCGAGTGCTG 100
BSNT_00538 101 AAACGGCGAACAAATCGAATGAGCTTACAGCACCGTCGATCAAAAGCGGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 101 AAACGGCGAACAAATCGAATGAGCTTACAGCACCGTCGATCAAAAGCGGA 150
BSNT_00538 151 ACCATTCTTCATGCATGGAATTGGTCGTTCAATACGTTAAAACACAATAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 151 ACCATTCTTCATGCATGGAATTGGTCGTTCAATACGTTAAAACACAATAT 200
BSNT_00538 201 GAAGGATATTCATGATGCAGGATATACAGCCATTCAGACATCTCCGATTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 201 GAAGGATATTCATGATGCAGGATATACAGCCATTCAGACATCTCCGATTA 250
BSNT_00538 251 ACCAAGTAAAGGAAGGGAATCAAGGAGATAAAAGCATGTCGAACTGGTAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 251 ACCAAGTAAAGGAAGGGAATCAAGGAGATAAAAGCATGTCGAACTGGTAC 300
BSNT_00538 301 TGGCTGTATCAGCCGACATCGTATCAAATTGGCAACCGTTACTTAGGTAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 301 TGGCTGTATCAGCCGACATCGTATCAAATTGGCAACCGTTACTTAGGTAC 350
BSNT_00538 351 TGAACAAGAATTTAAAGAAATGTGTGCAGCCGCTGAAGAATATGGCATAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 351 TGAACAAGAATTTAAAGAAATGTGTGCAGCCGCTGAAGAATATGGCATAA 400
BSNT_00538 401 AGGTCATTGTTGACGCGGTCATCAATCATACCACCAGTGATTATGCCGCG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 401 AGGTCATTGTTGACGCGGTCATCAATCATACCACCAGTGATTATGCCGCG 450
BSNT_00538 451 ATTTCCAATGAGGTTAAGAGTATTCCAAACTGGACACATGGAAACACACA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 451 ATTTCCAATGAGGTTAAGAGTATTCCAAACTGGACACATGGAAACACACA 500
BSNT_00538 501 AATTAAAAACTGGTCTGATCGATGGGATGTCACGCAGAATTCATTGCCCG 550
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU03040___am 501 AATTAAAAACTGGTCTGATCGATGGGATGTCACGCAGAATTCATTGCTCG 550
BSNT_00538 551 GGCTGTATGACTGGAATACACAAAATACACAAGTACAGTCCTATCTGAAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 551 GGCTGTATGACTGGAATACACAAAATACACAAGTACAGTCCTATCTGAAA 600
BSNT_00538 601 CGGTTCTTAGAAAGGGCATTGAATGACGGGGCAGACGGTTTTCGATTTGA 650
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU03040___am 601 CGGTTCTTAGACAGGGCATTGAATGACGGGGCAGACGGTTTTCGATTTGA 650
BSNT_00538 651 TGCCGCCAAACATATAGAGCTTCCGGATGATGGGAGTTACGGCAGTCAAT 700
||||||||||||||||||||||||.||||||||.||||||||||||||||
BSU03040___am 651 TGCCGCCAAACATATAGAGCTTCCAGATGATGGCAGTTACGGCAGTCAAT 700
BSNT_00538 701 TTTGGCCGAATATCACAAATACATCTGCAGAGTTCCAATACGGAGAAATC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 701 TTTGGCCGAATATCACAAATACATCTGCAGAGTTCCAATACGGAGAAATC 750
BSNT_00538 751 CTGCAGGATAGTGCCTCCAGAGATGCTGCATATGCGAATTATATGGATGT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 751 CTGCAGGATAGTGCCTCCAGAGATGCTGCATATGCGAATTATATGGATGT 800
BSNT_00538 801 GACAGCGTCTAACTATGGGCATTCCATAAGGTCCGCTTTAAAGAATCGTA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 801 GACAGCGTCTAACTATGGGCATTCCATAAGGTCCGCTTTAAAGAATCGTA 850
BSNT_00538 851 ATCTGGGCGTGTCGAATATCTCCCACTATGCATCTGATGTGTCTGCGGAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 851 ATCTGGGCGTGTCGAATATCTCCCACTATGCATCTGATGTGTCTGCGGAC 900
BSNT_00538 901 AAGCTGGTGACATGGGTGGAGTCGCATGATACGTATGCCAATGATGATGA 950
|||||.|||||||||||.||||||||||||||||||||||||||||||||
BSU03040___am 901 AAGCTAGTGACATGGGTAGAGTCGCATGATACGTATGCCAATGATGATGA 950
BSNT_00538 951 AGAGTCGACATGGATGAGCGATGATGATATCCGTTTAGGCTGGGCGGTGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 951 AGAGTCGACATGGATGAGCGATGATGATATCCGTTTAGGCTGGGCGGTGA 1000
BSNT_00538 1001 TAGCTTCTCGTTCAGGCAGTACGCCTCTTTTCTTTTCCAGACCTGAGGGA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1001 TAGCTTCTCGTTCAGGCAGTACGCCTCTTTTCTTTTCCAGACCTGAGGGA 1050
BSNT_00538 1051 GGCGGAAATGGTGTGAGATTCCCGGGGAAAAGCCAAATAGGCGATCGCGG 1100
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU03040___am 1051 GGCGGAAATGGTGTGAGGTTCCCGGGGAAAAGCCAAATAGGCGATCGCGG 1100
BSNT_00538 1101 GAGTGCTTTATTTGAAGATCAGGCTATCACTGCGGTCAATAGATTTCACA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1101 GAGTGCTTTATTTGAAGATCAGGCTATCACTGCGGTCAATAGATTTCACA 1150
BSNT_00538 1151 ATGTGATGGCTGGACAGCATGAGGAACTCTCGAACCCGAATGGAAACAAC 1200
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU03040___am 1151 ATGTGATGGCTGGACAGCCTGAGGAACTCTCGAACCCGAATGGAAACAAC 1200
BSNT_00538 1201 CAGATATTTATGAATCAGCGCGGCTCACATGGCGTTGTGCTGGCAAATGC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1201 CAGATATTTATGAATCAGCGCGGCTCACATGGCGTTGTGCTGGCAAATGC 1250
BSNT_00538 1251 AGGTTCATCCTCTGTCTCTATCAATACGGCAACAAAATTGCCTGATGGCA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1251 AGGTTCATCCTCTGTCTCTATCAATACGGCAACAAAATTGCCTGATGGCA 1300
BSNT_00538 1301 GGTATGACAATAAAGCTGGAGCGGGTTCATTTCAAGTGAACGATGGTAAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1301 GGTATGACAATAAAGCTGGAGCGGGTTCATTTCAAGTGAACGATGGTAAA 1350
BSNT_00538 1351 CTGACAGGCACGATCAATGCCAGGTCTGTAGCTGTGCTTTATCCTGATGA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03040___am 1351 CTGACAGGCACGATCAATGCCAGGTCTGTAGCTGTGCTTTATCCTGATGA 1400
BSNT_00538 1401 TATTG--------------------------------AAATCAGGTGTAA 1418
||||| |||.|||||||||
BSU03040___am 1401 TATTGCAAAAGCGCCTCATGTTTTCCTTGAGAATTACAAAACAGGTGTAA 1450
BSNT_00538 1419 CACATTCTTTCAATGA---------------------------------- 1434
||||||||||||||||
BSU03040___am 1451 CACATTCTTTCAATGATCAACTGACGATTACCTTGCGTGCAGATGCGAAT 1500
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1501 ACAACAAAAGCCGTTTATCAAATCAATAATGGACCAGAGACGGCGTTTAA 1550
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1551 GGATGGAGATCAATTCACAATCGGAAAAGGAGATCCATTTGGCAAAACAT 1600
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1601 ACACCATCATGTTAAAAGGAACGAACAGTGATGGTGTAACGAGGACCGAG 1650
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1651 AAATACAGTTTTGTTAAAAGAGATCCAGCGTCGGCCAAAACCATCGGCTA 1700
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1701 TCAAAATCCGAATCATTGGAGCCAGGTAAATGCTTATATCTATAAACATG 1750
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1751 ATGGGAGCCGAGTAATTGAATTGACCGGATCTTGGCCTGGAAAACCAATG 1800
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1801 ACTAAAAATGCAGACGGAATTTACACGCTGACGCTGCCTGCGGACACGGA 1850
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1851 TACAACCAACGCAAAAGTGATTTTTAATAATGGCAGCGCCCAAGTGCCCG 1900
BSNT_00538 1434 -------------------------------------------------- 1434
BSU03040___am 1901 GTCAGAATCAGCCTGGCTTTGATTACGTGCTAAATGGTTTATATAATGAC 1950
BSNT_00538 1434 ------------------------------ 1434
BSU03040___am 1951 TCGGGCTTAAGCGGTTCTCTTCCCCATTGA 1980
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