Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00530 and BSU03000

See DNA alignment / Visit BSNT_00530 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:42
# Commandline: needle
#    -asequence pep-align/BSNT_00530___opuAC.1.22522.seq
#    -bsequence pep-align/BSU03000___opuAC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00530___opuAC-BSU03000___opuAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00530___opuAC-BSU03000___opuAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00530___opuAC
# 2: BSU03000___opuAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     291/293 (99.3%)
# Similarity:   293/293 (100.0%)
# Gaps:           0/293 ( 0.0%)
# Score: 1505.0
# 
#
#=======================================

BSNT_00530___      1 MLKKIIGIGVSAMLALSLAACGSENEKNASAAEQVNKTIIGIDPGSGIMS     50
                     |||||||||||||||||||||||||::|||||||||||||||||||||||
BSU03000___op      1 MLKKIIGIGVSAMLALSLAACGSENDENASAAEQVNKTIIGIDPGSGIMS     50

BSNT_00530___     51 LTDKAMKDYDLNDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFS    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op     51 LTDKAMKDYDLNDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFS    100

BSNT_00530___    101 RYKLKYLDDPKQSYGSAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    101 RYKLKYLDDPKQSYGSAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMG    150

BSNT_00530___    151 EIMIKVEEGEKPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    151 EIMIKVEEGEKPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWD    200

BSNT_00530___    201 SEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    201 SEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNT    250

BSNT_00530___    251 HKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK    293
                     |||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    251 HKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK    293


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