Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00530 and BSU03000

See Amino acid alignment / Visit BSNT_00530 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:42
# Commandline: needle
#    -asequence dna-align/BSNT_00530___opuAC.1.22522.seq
#    -bsequence dna-align/BSU03000___opuAC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00530___opuAC-BSU03000___opuAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00530___opuAC-BSU03000___opuAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00530___opuAC
# 2: BSU03000___opuAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity:     869/882 (98.5%)
# Similarity:   869/882 (98.5%)
# Gaps:           0/882 ( 0.0%)
# Score: 4293.0
# 
#
#=======================================

BSNT_00530___      1 ATGCTTAAAAAAATCATCGGCATCGGCGTTTCCGCCATGCTGGCGCTCTC     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU03000___op      1 ATGCTTAAAAAAATCATAGGCATCGGCGTTTCCGCCATGCTGGCGCTCTC     50

BSNT_00530___     51 ACTTGCGGCTTGCGGTTCAGAAAACGAAAAAAATGCATCCGCAGCAGAAC    100
                     |||||||||||||||||||||||||||..|||||||||||||||||||||
BSU03000___op     51 ACTTGCGGCTTGCGGTTCAGAAAACGATGAAAATGCATCCGCAGCAGAAC    100

BSNT_00530___    101 AGGTGAATAAGACCATCATCGGGATTGACCCCGGTTCAGGGATTATGTCC    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    101 AAGTGAATAAGACCATCATCGGGATTGACCCCGGTTCAGGGATTATGTCC    150

BSNT_00530___    151 CTGACTGACAAAGCGATGAAGGATTATGACCTGAATGACTGGACATTGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    151 CTGACTGACAAAGCGATGAAGGATTATGACCTGAATGACTGGACATTGAT    200

BSNT_00530___    201 TTCTGCGTCAAGTGCTGCGATGACCGCTACGCTTAAAAAGTCATACGACC    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    201 TTCAGCGTCAAGTGCTGCGATGACCGCTACGCTTAAAAAGTCATACGACC    250

BSNT_00530___    251 GTAAGAAACCGATTATCATTACAGGATGGACACCGCACTGGATGTTCTCT    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU03000___op    251 GTAAGAAACCGATTATCATTACAGGATGGACACCGCACTGGATGTTCTCC    300

BSNT_00530___    301 AGATATAAGCTGAAATATCTCGATGATCCGAAACAATCTTATGGCAGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    301 AGATATAAGCTGAAATATCTCGATGATCCGAAACAATCTTATGGCAGCGC    350

BSNT_00530___    351 AGAGGAAATCCATACGATCACACGCAAAGGCTTCAGCAAAGAACAGCCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU03000___op    351 AGAGGAAATCCATACGATCACACGCAAAGGCTTCAGCAAAGAGCAGCCGA    400

BSNT_00530___    401 ATGCCGCAAAGCTTCTGAGCCAGTTTAAATGGACGCAAGACGAAATGGGC    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU03000___op    401 ATGCCGCAAAGCTTCTGAGCCAGTTTAAATGGACGCAGGACGAAATGGGC    450

BSNT_00530___    451 GAAATCATGATCAAGGTGGAGGAAGGCGAGAAACCTGCCAAAGTTGCTGC    500
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU03000___op    451 GAAATCATGATCAAGGTGGAAGAAGGCGAGAAACCTGCCAAAGTTGCTGC    500

BSNT_00530___    501 CGAGTACGTCAATAAACACAAGGATCAGATTGCCGAATGGACAAAAGGCG    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    501 TGAGTACGTCAATAAACACAAGGATCAGATTGCCGAATGGACAAAAGGCG    550

BSNT_00530___    551 TTCAAAAGGTAAAGGGAGACAAAATCAACCTTGCCTATGTGGCGTGGGAC    600
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU03000___op    551 TTCAAAAGGTGAAGGGAGACAAAATCAACCTTGCCTATGTGGCGTGGGAC    600

BSNT_00530___    601 AGTGAGATTGCAAGTACAAACGTCATAGGCAAAGTCTTAGAAGACTTGGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    601 AGTGAGATTGCAAGTACAAACGTCATAGGCAAAGTCTTAGAAGACTTGGG    650

BSNT_00530___    651 CTATGAGGTAACACTTACTCAGGTAGAGGCTGGGCCGATGTGGACTGCAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    651 CTATGAGGTAACACTTACTCAGGTAGAGGCTGGGCCGATGTGGACTGCAA    700

BSNT_00530___    701 TTGCGACGGGAAGTGCGGATGCATCCCTTTCCGCATGGCTGCCGAATACC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    701 TTGCGACGGGAAGTGCGGATGCATCCCTTTCCGCATGGCTGCCGAATACC    750

BSNT_00530___    751 CATAAAGCATACGCCGCTAAATATAAAGGCAAATATGATGATATTGGCAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03000___op    751 CATAAAGCATACGCCGCTAAATATAAAGGCAAATATGATGATATTGGCAC    800

BSNT_00530___    801 AAGTATGACGGGTGTGAAGATGGGGCTTGTTGTTCCTCAATATATGAAAA    850
                     .||||||||.||||||||||||||||||||||||||||||||||||||||
BSU03000___op    801 CAGTATGACTGGTGTGAAGATGGGGCTTGTTGTTCCTCAATATATGAAAA    850

BSNT_00530___    851 ATGTCAACTCAATTGAAGATTTGAAGAAGTAA    882
                     ||||||||||||||||||||||||||||||||
BSU03000___op    851 ATGTCAACTCAATTGAAGATTTGAAGAAGTAA    882


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