Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00502 and BSU02830

See DNA alignment / Visit BSNT_00502 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:39
# Commandline: needle
#    -asequence pep-align/BSNT_00502___ycdF.1.22522.seq
#    -bsequence pep-align/BSU02830___ycdF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00502___ycdF-BSU02830___ycdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00502___ycdF-BSU02830___ycdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00502___ycdF
# 2: BSU02830___ycdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     252/258 (97.7%)
# Similarity:   255/258 (98.8%)
# Gaps:           0/258 ( 0.0%)
# Score: 1274.0
# 
#
#=======================================

BSNT_00502___      1 MYKDLTGKTAIVTGSSKGIGKAIAERFGQEKMNVVVNYHSDPSGADETLE     50
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
BSU02830___yc      1 MYKDLTGKTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSGADETLE     50

BSNT_00502___     51 IIKQNGGKAVAVEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGDEA    100
                     ||||||||||:||||||||||||||||||||||||||||||||||||.||
BSU02830___yc     51 IIKQNGGKAVSVEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEA    100

BSNT_00502___    101 MPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc    101 MPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQ    150

BSNT_00502___    151 IPRPVNVQYSTSKGGIKMMTETLALNYADKEIRVNAIAPGTIATESNVDT    200
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU02830___yc    151 IPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVDT    200

BSNT_00502___    201 KKEESRQKQLKKIPMQAFGKPEEVAAAAAWLVSEEASYVTGTTLFVDGGM    250
                     |||||||||||||||:|||||||||||||||||||||||||.||||||||
BSU02830___yc    201 KKEESRQKQLKKIPMKAFGKPEEVAAAAAWLVSEEASYVTGATLFVDGGM    250

BSNT_00502___    251 TLYPSQLE    258
                     ||||||||
BSU02830___yc    251 TLYPSQLE    258


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