Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00502 and BSU02830

See Amino acid alignment / Visit BSNT_00502 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:39
# Commandline: needle
#    -asequence dna-align/BSNT_00502___ycdF.1.22522.seq
#    -bsequence dna-align/BSU02830___ycdF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00502___ycdF-BSU02830___ycdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00502___ycdF-BSU02830___ycdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00502___ycdF
# 2: BSU02830___ycdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity:     764/777 (98.3%)
# Similarity:   764/777 (98.3%)
# Gaps:           0/777 ( 0.0%)
# Score: 3768.0
# 
#
#=======================================

BSNT_00502___      1 ATGTACAAAGATTTAACCGGAAAAACAGCGATTGTGACAGGGTCTTCAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc      1 ATGTACAAAGATTTAACCGGAAAAACAGCGATTGTGACAGGGTCTTCAAA     50

BSNT_00502___     51 AGGAATCGGGAAAGCCATTGCGGAACGGTTCGGACAGGAGAAAATGAATG    100
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU02830___yc     51 AGGAATCGGGAAAGCCATTGCGGAACGGTTCGGAAAGGAGAAAATGAATG    100

BSNT_00502___    101 TTGTTGTAAATTACCACAGCGACCCGTCTGGAGCAGATGAAACTCTGGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc    101 TTGTTGTAAATTACCACAGCGACCCGTCTGGAGCAGATGAAACTCTGGAA    150

BSNT_00502___    151 ATCATTAAGCAGAACGGAGGGAAAGCCGTCGCAGTTGAGGCGGACGTGTC    200
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU02830___yc    151 ATCATTAAGCAGAACGGAGGGAAAGCCGTCTCAGTTGAGGCGGACGTGTC    200

BSNT_00502___    201 AAAAGAAGAGGGGATTCAGGCGCTCTTGGACACAGCTTTAGAGCATTTCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc    201 AAAAGAAGAGGGGATTCAGGCGCTCTTGGACACAGCTTTAGAGCATTTCG    250

BSNT_00502___    251 GCACGCTCGATGTGATGGTAAACAACTCCGGTTTTAACGGTGATGAGGCG    300
                     ||||||||||||||||||||||||||||||||||||||||.|.|||||||
BSU02830___yc    251 GCACGCTCGATGTGATGGTAAACAACTCCGGTTTTAACGGCGTTGAGGCG    300

BSNT_00502___    301 ATGCCGCATGAGATGAGTCTTGAAGATTGGCAGAGAGTAATTGATGTCAA    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU02830___yc    301 ATGCCGCATGAGATGAGTCTTGAAGATTGGCAGAGAGTGATTGATGTCAA    350

BSNT_00502___    351 TGTTACCGGAACCTTTCTGGGAGCGAAAGCAGCACTTAACCACATGATGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc    351 TGTTACCGGAACCTTTCTGGGAGCGAAAGCAGCACTTAACCACATGATGA    400

BSNT_00502___    401 AAAACAATATCAAGGGCAATGTGCTGAATATCTCAAGTGTTCATCAGCAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc    401 AAAACAATATCAAGGGCAATGTGCTGAATATCTCAAGTGTTCATCAGCAG    450

BSNT_00502___    451 ATTCCGCGCCCTGTCAACGTTCAGTATTCCACATCCAAAGGCGGCATCAA    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU02830___yc    451 ATTCCGCGCCCTGTAAACGTTCAGTATTCCACATCCAAAGGCGGCATCAA    500

BSNT_00502___    501 GATGATGACGGAAACGCTGGCGCTCAATTATGCGGATAAGGAAATCCGCG    550
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU02830___yc    501 GATGATGACGGAAACGCTGGCGCTCAATTATGCGGATAAGGGAATCCGCG    550

BSNT_00502___    551 TCAATGCGATAGCGCCCGGCACCATTGCCACAGAATCAAATGTTGATACG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02830___yc    551 TCAATGCGATAGCGCCCGGCACCATTGCCACAGAATCAAATGTTGATACG    600

BSNT_00502___    601 AAAAAGGAAGAGAGCAGGCAAAAACAATTGAAAAAAATCCCGATGCAAGC    650
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU02830___yc    601 AAAAAGGAAGAGAGCAGGCAAAAACAATTGAAAAAAATCCCGATGAAAGC    650

BSNT_00502___    651 CTTCGGAAAGCCTGAAGAAGTGGCGGCAGCAGCGGCTTGGCTCGTATCTG    700
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU02830___yc    651 CTTCGGAAAGCCTGAAGAAGTGGCGGCAGCAGCAGCTTGGCTCGTATCTG    700

BSNT_00502___    701 AGGAAGCAAGCTATGTGACCGGCACAACACTTTTCGTCGATGGCGGGATG    750
                     |||||||||||||||||||||||.||||||||||||||||.|||||.|||
BSU02830___yc    701 AGGAAGCAAGCTATGTGACCGGCGCAACACTTTTCGTCGACGGCGGAATG    750

BSNT_00502___    751 ACACTTTATCCGTCTCAGCTTGAATAG    777
                     |||||||||||.|||||||||||||||
BSU02830___yc    751 ACACTTTATCCATCTCAGCTTGAATAG    777


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