Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00475 and BSU02680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:36
# Commandline: needle
# -asequence pep-align/BSNT_00475___lmrA.1.22522.seq
# -bsequence pep-align/BSU02680___lmrA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00475___lmrA-BSU02680___lmrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00475___lmrA-BSU02680___lmrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00475___lmrA
# 2: BSU02680___lmrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 186/188 (98.9%)
# Similarity: 187/188 (99.5%)
# Gaps: 0/188 ( 0.0%)
# Score: 953.0
#
#
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BSNT_00475___ 1 MSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGK 50
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BSU02680___lm 1 MSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGK 50
BSNT_00475___ 51 EQLAIEAVNEMKEYIRQKIADCMESYTDPAEGIQAFLKELSCQFSCTEDI 100
||||||||||||||||||||||||:.||||||||||||||||||||||||
BSU02680___lm 51 EQLAIEAVNEMKEYIRQKIADCMEACTDPAEGIQAFLKELSCQFSCTEDI 100
BSNT_00475___ 101 EGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKE 150
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BSU02680___lm 101 EGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKE 150
BSNT_00475___ 151 ASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR 188
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BSU02680___lm 151 ASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR 188
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