Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00475 and BSU02680

See Amino acid alignment / Visit BSNT_00475 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:36
# Commandline: needle
#    -asequence dna-align/BSNT_00475___lmrA.1.22522.seq
#    -bsequence dna-align/BSU02680___lmrA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00475___lmrA-BSU02680___lmrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00475___lmrA-BSU02680___lmrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00475___lmrA
# 2: BSU02680___lmrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity:     564/567 (99.5%)
# Similarity:   564/567 (99.5%)
# Gaps:           0/567 ( 0.0%)
# Score: 2808.0
# 
#
#=======================================

BSNT_00475___      1 ATGAGTTATGGAGATTCCCGTGAGAAAATCCTTTCGGCAGCTACCCGGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm      1 ATGAGTTATGGAGATTCCCGTGAGAAAATCCTTTCGGCAGCTACCCGGCT     50

BSNT_00475___     51 TTTTCAGCTGCAAGGGTATTACGGCACGGGGCTGAACCAGATTATAAAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm     51 TTTTCAGCTGCAAGGGTATTACGGCACGGGGCTGAACCAGATTATAAAGG    100

BSNT_00475___    101 AAAGCGGCGCGCCTAAAGGCTCTCTTTACTACCACTTTCCCGGGGGTAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    101 AAAGCGGCGCGCCTAAAGGCTCTCTTTACTACCACTTTCCCGGGGGTAAA    150

BSNT_00475___    151 GAACAGCTTGCGATCGAAGCCGTGAATGAGATGAAGGAGTATATCCGTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    151 GAACAGCTTGCGATCGAAGCCGTGAATGAGATGAAGGAGTATATCCGTCA    200

BSNT_00475___    201 GAAAATCGCGGACTGCATGGAATCCTACACCGATCCAGCGGAAGGCATTC    250
                     ||||||||||||||||||||||.|||.|||||||||||||||||||||||
BSU02680___lm    201 GAAAATCGCGGACTGCATGGAAGCCTGCACCGATCCAGCGGAAGGCATTC    250

BSNT_00475___    251 AAGCCTTTTTGAAGGAGCTCTCCTGCCAGTTTTCATGTACAGAAGACATT    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU02680___lm    251 AAGCCTTTTTGAAGGAGCTCTCCTGCCAGTTTTCATGTACGGAAGACATT    300

BSNT_00475___    301 GAAGGCTTGCCTGTGGGCTTGCTAGCGGCTGAGACGTCATTGAAAAGCGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    301 GAAGGCTTGCCTGTGGGCTTGCTAGCGGCTGAGACGTCATTGAAAAGCGA    350

BSNT_00475___    351 ACCGTTGCGCGAAGCCTGTCATGAAGCCTACAAAGAATGGGCCTCTGTGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    351 ACCGTTGCGCGAAGCCTGTCATGAAGCCTACAAAGAATGGGCCTCTGTGT    400

BSNT_00475___    401 ATGAGGAAAAACTGCGGCAGACTGGCTGCAGCGAGAGCCGTGCAAAAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    401 ATGAGGAAAAACTGCGGCAGACTGGCTGCAGCGAGAGCCGTGCAAAAGAA    450

BSNT_00475___    451 GCCAGCACTGTGGTTAACGCGATGATTGAAGGCGGCATCCTTTTATCTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    451 GCCAGCACTGTGGTTAACGCGATGATTGAAGGCGGCATCCTTTTATCTTT    500

BSNT_00475___    501 GACGGCAAAAAACAGTACGCCGCTCCTTCATATCTCCAGCTGCATTCCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02680___lm    501 GACGGCAAAAAACAGTACGCCGCTCCTTCATATCTCCAGCTGCATTCCTG    550

BSNT_00475___    551 ACCTGCTGAAGAGATAA    567
                     |||||||||||||||||
BSU02680___lm    551 ACCTGCTGAAGAGATAA    567


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