Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00380 and BSU02160

See DNA alignment / Visit BSNT_00380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:27
# Commandline: needle
#    -asequence pep-align/BSNT_00380___ybfA.1.22522.seq
#    -bsequence pep-align/BSU02160___ybfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00380___ybfA-BSU02160___ybfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00380___ybfA-BSU02160___ybfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00380___ybfA
# 2: BSU02160___ybfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     297/309 (96.1%)
# Similarity:   300/309 (97.1%)
# Gaps:           4/309 ( 1.3%)
# Score: 1538.0
# 
#
#=======================================

BSNT_00380___      1 MGIDLKTRESSVGLKFRKFNRFYTNVLGFLNEHIYDSPFSLTETRILFEI     50
                         :|||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb      1 ----MKTRESSVGLKFRKFNRFYTNVLGFLNEHIYDSPFSLTETRILFEI     46

BSNT_00380___     51 YNTPNCTAKALQDKLGLDRGYVSRIVKQFEIEDLIYKQRSKDDARHHYIF    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU02160___yb     47 YNTPNCTAKALQDKLGLDRGYVSRIVKQFEKEDLIYKQRSKDDARHHYIF     96

BSNT_00380___    101 VTETGKTIYKKLEEKANEQVELMLKEINQKEQQKLSEAMAEIEEILSQSL    150
                     |||||||||||||||||||||||||.||||||.||:|||||||.||||||
BSU02160___yb     97 VTETGKTIYKKLEEKANEQVELMLKVINQKEQHKLAEAMAEIEAILSQSL    146

BSNT_00380___    151 SARTSEISIRDYFLSEDIQLLIEKQRQFYAEAHGWDDTFLAYLQETFDAD    200
                     |||.|||||||||||||:||||||||||||||||||||||||||||||||
BSU02160___yb    147 SARASEISIRDYFLSEDLQLLIEKQRQFYAEAHGWDDTFLAYLQETFDAD    196

BSNT_00380___    201 IEKIWIAESGGKFAGSVGLVKHDEKTVQLRWFLVDADFRGRGLGTQLLEH    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    197 IEKIWIAESGGKFAGSVGLVKHDEKTVQLRWFLVDADFRGRGLGTQLLEH    246

BSNT_00380___    251 LVAYCQDMKFDRIFLWTVSTMAEARPLYKKFGFRISEVKQEAPLWGQQLT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    247 LVAYCQDMKFDRIFLWTVSTMAEARPLYKKFGFRISEVKQEAPLWGQQLT    296

BSNT_00380___    301 EERWDLELS    309
                     |||||||||
BSU02160___yb    297 EERWDLELS    305


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