Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00380 and BSU02160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:27
# Commandline: needle
# -asequence dna-align/BSNT_00380___ybfA.1.22522.seq
# -bsequence dna-align/BSU02160___ybfA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00380___ybfA-BSU02160___ybfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00380___ybfA-BSU02160___ybfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00380___ybfA
# 2: BSU02160___ybfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity: 908/930 (97.6%)
# Similarity: 908/930 (97.6%)
# Gaps: 12/930 ( 1.3%)
# Score: 4500.0
#
#
#=======================================
BSNT_00380___ 1 GTGGGGATTGATTTGAAAACAAGAGAATCATCTGTCGGATTAAAATTCAG 50
||||||||||||||||||||||||||.|||||||||||
BSU02160___yb 1 ------------TTGAAAACAAGAGAATCATCTGTCGGGTTAAAATTCAG 38
BSNT_00380___ 51 AAAGTTCAATCGATTTTATACAAACGTCCTTGGTTTCCTTAATGAGCACA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 39 AAAGTTCAATCGATTTTATACAAACGTCCTTGGTTTCCTTAATGAGCACA 88
BSNT_00380___ 101 TTTACGACAGCCCGTTTTCCTTAACAGAAACACGGATTTTATTTGAGATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 89 TTTACGACAGCCCGTTTTCCTTAACAGAAACACGGATTTTATTTGAGATT 138
BSNT_00380___ 151 TATAATACGCCTAATTGTACGGCAAAAGCTCTTCAGGATAAGCTGGGGCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 139 TATAATACGCCTAATTGTACGGCAAAAGCTCTTCAGGATAAGCTGGGGCT 188
BSNT_00380___ 201 TGACCGGGGATATGTCAGCAGGATTGTGAAGCAGTTTGAAATAGAAGATT 250
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU02160___yb 189 TGACCGGGGATATGTCAGCAGGATTGTGAAGCAGTTTGAAAAAGAAGATT 238
BSNT_00380___ 251 TGATCTATAAACAGAGGAGCAAAGATGACGCTCGCCACCATTACATTTTT 300
||||.||||||||||||||||||||||||||.||||||||||||||||||
BSU02160___yb 239 TGATTTATAAACAGAGGAGCAAAGATGACGCCCGCCACCATTACATTTTT 288
BSNT_00380___ 301 GTCACAGAAACAGGAAAAACGATTTATAAAAAGCTGGAGGAGAAAGCCAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 289 GTCACAGAAACAGGAAAAACGATTTATAAAAAGCTGGAGGAGAAAGCCAA 338
BSNT_00380___ 351 CGAACAAGTAGAACTGATGCTGAAGGAAATCAACCAAAAGGAGCAGCAGA 400
||||||||||||||||||||||||||.|||||||||||||||||||||.|
BSU02160___yb 339 CGAACAAGTAGAACTGATGCTGAAGGTAATCAACCAAAAGGAGCAGCACA 388
BSNT_00380___ 401 AGCTTTCCGAGGCGATGGCAGAGATTGAAGAGATCCTTTCACAGTCGCTT 450
|||||.||||||||||||||||||||||||.|||||||||||||||||||
BSU02160___yb 389 AGCTTGCCGAGGCGATGGCAGAGATTGAAGCGATCCTTTCACAGTCGCTT 438
BSNT_00380___ 451 TCTGCCAGAACATCAGAGATATCGATTAGAGATTATTTTCTTTCGGAGGA 500
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 439 TCTGCCAGAGCATCAGAGATATCGATTAGAGATTATTTTCTTTCGGAGGA 488
BSNT_00380___ 501 TATTCAACTCCTTATTGAGAAACAAAGACAATTTTACGCGGAGGCTCACG 550
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 489 TCTTCAACTCCTTATTGAGAAACAAAGACAATTTTACGCGGAGGCTCACG 538
BSNT_00380___ 551 GTTGGGATGACACGTTTTTAGCTTATCTTCAGGAGACATTTGACGCTGAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 539 GTTGGGATGACACGTTTTTAGCTTATCTTCAGGAGACATTTGACGCTGAC 588
BSNT_00380___ 601 ATCGAAAAAATATGGATTGCGGAAAGCGGCGGGAAATTTGCCGGCTCTGT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 589 ATCGAAAAAATATGGATTGCGGAAAGCGGCGGGAAATTTGCCGGCTCTGT 638
BSNT_00380___ 651 CGGGTTGGTCAAGCACGATGAAAAGACAGTCCAGCTCAGATGGTTTCTGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 639 CGGGTTGGTCAAGCACGATGAAAAGACAGTCCAGCTCAGATGGTTTCTGG 688
BSNT_00380___ 701 TTGATGCGGATTTTCGGGGCAGGGGGCTTGGCACGCAATTGCTGGAGCAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 689 TTGATGCGGATTTTCGGGGCAGGGGGCTTGGCACGCAATTGCTGGAGCAT 738
BSNT_00380___ 751 CTGGTTGCATACTGCCAAGACATGAAGTTTGACCGCATTTTCCTTTGGAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 739 CTGGTTGCATACTGCCAAGACATGAAGTTTGACCGCATTTTCCTTTGGAC 788
BSNT_00380___ 801 GGTGAGCACGATGGCTGAGGCTCGTCCGCTCTATAAAAAATTTGGATTCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 789 GGTGAGCACGATGGCTGAGGCTCGTCCGCTCTATAAAAAATTTGGATTCA 838
BSNT_00380___ 851 GGATAAGTGAAGTAAAACAAGAAGCGCCATTATGGGGACAGCAGCTGACA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb 839 GGATAAGTGAAGTAAAACAAGAAGCGCCATTATGGGGACAGCAGCTGACA 888
BSNT_00380___ 901 GAAGAACGGTGGGATTTGGAGCTGTCATGA 930
||||||||||||||||||||||||||||||
BSU02160___yb 889 GAAGAACGGTGGGATTTGGAGCTGTCATGA 918
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