Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00345 and BSU01760

See DNA alignment / Visit BSNT_00345 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:21
# Commandline: needle
#    -asequence pep-align/BSNT_00345___ybbR.1.22522.seq
#    -bsequence pep-align/BSU01760___ybbR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00345___ybbR-BSU01760___ybbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00345___ybbR-BSU01760___ybbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00345___ybbR
# 2: BSU01760___ybbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity:     476/484 (98.3%)
# Similarity:   478/484 (98.8%)
# Gaps:           1/484 ( 0.2%)
# Score: 2395.0
# 
#
#=======================================

BSNT_00345___      1 MDKFLNYRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEA     50
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb      1 MDKFLNNRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEA     50

BSNT_00345___     51 TLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYAD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb     51 TLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYAD    100

BSNT_00345___    101 MEHLKTGTHKVELKAKNVSDGMTISINPSVTTVTIQERTTKSFPVEVEYY    150
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
BSU01760___yb    101 MEHLKTGTHKVELKAKNVSDGLTISINPSVTTVTIQERTTKSFPVEVEYY    150

BSNT_00345___    151 NKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    151 NKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIE    200

BSNT_00345___    201 KEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    201 KEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDG    250

BSNT_00345___    251 VSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADILL    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU01760___yb    251 VSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADIPL    300

BSNT_00345___    301 PDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNIEYLDPESQ    350
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
BSU01760___yb    301 PDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNIEFLDPESQ    350

BSNT_00345___    351 AIDVTAKGSPANIKKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS    400
                     ||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU01760___yb    351 AIDVTAKGSPTNINKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS    400

BSNT_00345___    401 LGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDDTDKQTNDQKNNQQEDTKN    450
                     |||||||||||||||||||||||||||||| |||||||||||||||||||
BSU01760___yb    401 LGRKNAKIKLTSKKSNTSTNDNSSNTSGNQ-DTDKQTNDQKNNQQEDTKN    449

BSNT_00345___    451 TDKNNNDQNQDENKDQNQDQDEDESTANSQSSSE    484
                     |||||||||||.||||||||||||||||||||||
BSU01760___yb    450 TDKNNNDQNQDGNKDQNQDQDEDESTANSQSSSE    483


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