Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00345 and BSU01760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:22
# Commandline: needle
# -asequence dna-align/BSNT_00345___ybbR.1.22522.seq
# -bsequence dna-align/BSU01760___ybbR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00345___ybbR-BSU01760___ybbR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00345___ybbR-BSU01760___ybbR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00345___ybbR
# 2: BSU01760___ybbR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1455
# Identity: 1436/1455 (98.7%)
# Similarity: 1436/1455 (98.7%)
# Gaps: 3/1455 ( 0.2%)
# Score: 7105.0
#
#
#=======================================
BSNT_00345___ 1 ATGGATAAATTCTTAAACTACCGCTGGGCTGTGAAAATCATTGCTCTGCT 50
||||||||||||||||||.|||||||||||||||||||.|||||||||||
BSU01760___yb 1 ATGGATAAATTCTTAAACAACCGCTGGGCTGTGAAAATTATTGCTCTGCT 50
BSNT_00345___ 51 TTTCGCGCTCTTGCTTTATGTGGCGGTTAACAGCAACCAAGCACCGACTC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 51 TTTCGCGCTCTTGCTTTATGTGGCGGTTAACAGCAACCAAGCACCGACTC 100
BSNT_00345___ 101 CGAAAAAACCGGGTGAATCTTTCTTTCCGACATCAACAACTGATGAAGCA 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 101 CAAAAAAACCGGGTGAATCTTTCTTTCCGACATCAACAACTGATGAAGCA 150
BSNT_00345___ 151 ACTCTGACTGATATTCCGGTTAAAGCGTATTATGATGATGAAAATTACGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 151 ACTCTGACTGATATTCCGGTTAAAGCGTATTATGATGATGAAAATTACGT 200
BSNT_00345___ 201 CGTAACGGGTGTTCCGCAAACGGTTAATGTCACGATAAAAGGCTCGACAA 250
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 201 CGTGACGGGTGTTCCGCAAACGGTTAATGTCACGATAAAAGGCTCGACAA 250
BSNT_00345___ 251 GCGCCGTGAAAAAGGCTCGGCAGACCAAAAACTTTGAAATATATGCTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU01760___yb 251 GCGCCGTGAAAAAGGCTCGGCAGACCAAAAACTTTGAAATATATGCCGAT 300
BSNT_00345___ 301 ATGGAACATTTGAAAACCGGCACACATAAGGTTGAGCTTAAGGCCAAAAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 301 ATGGAACATTTGAAAACCGGCACACATAAGGTTGAGCTTAAGGCCAAAAA 350
BSNT_00345___ 351 CGTGTCGGATGGGATGACAATCTCAATTAATCCGTCTGTTACGACAGTGA 400
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU01760___yb 351 CGTGTCGGATGGGCTGACAATCTCAATTAATCCGTCTGTTACGACAGTGA 400
BSNT_00345___ 401 CCATTCAGGAACGGACGACCAAAAGTTTTCCCGTAGAAGTGGAGTACTAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 401 CCATTCAGGAACGGACGACCAAAAGTTTTCCCGTAGAAGTGGAGTACTAC 450
BSNT_00345___ 451 AACAAAAGCAAGATGAAAAAAGGCTATTCTCCGGAGCAGCCGATTGTCAG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 451 AACAAAAGCAAGATGAAAAAAGGCTATTCTCCGGAGCAGCCGATTGTCAG 500
BSNT_00345___ 501 TCCGAAAAATGTGCAGATTACCGGATCGAAAAATGTCATCGATAATATTT 550
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU01760___yb 501 TCCGAAAAATGTGCAGATTACCGGATCGAAAAATGTGATCGATAATATTT 550
BSNT_00345___ 551 CTCTTGTAAAAGCTTCAGTGAATTTGGAAAACGCAGATGAAACGATTGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 551 CTCTTGTAAAAGCTTCAGTGAATTTGGAAAACGCAGATGAAACGATTGAA 600
BSNT_00345___ 601 AAGGAAGCGAAAGTGACTGTCTATGATAAAGACGGAAACGCGCTTCCTGT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 601 AAGGAAGCGAAAGTGACTGTCTATGATAAAGACGGAAACGCGCTTCCTGT 650
BSNT_00345___ 651 CGACGTGGAGCCCTCGGTCATCAAGATTACCGTTCCGGTGACAAGTCCGA 700
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01760___yb 651 CGACGTGGAGCCCTCGGTCATCAAGATTACCGTTCCGGTGACAAGCCCGA 700
BSNT_00345___ 701 GTAAAAAAGTGCCCTTTAAAATTGAACGGACAGGAAGCCTTCCTGACGGT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 701 GTAAAAAAGTGCCCTTTAAAATTGAACGGACAGGAAGCCTTCCTGACGGT 750
BSNT_00345___ 751 GTCAGCATAGCGAATATTGAATCCAGCCCCAGTGAAGTAACGGTTTACGG 800
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU01760___yb 751 GTCAGCATAGCGAATATTGAATCCAGCCCCAGTGAGGTAACGGTTTACGG 800
BSNT_00345___ 801 CTCACAGGATGTGTTGGATTCTCTTGAATTTATTGACGGCGTCAGCCTAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 801 CTCACAGGATGTGTTGGATTCTCTTGAATTTATTGACGGCGTCAGCCTAG 850
BSNT_00345___ 851 ATTTAAGTAAAATTAACAAGGATTCCGATATCGAGGCAGATATTCTGCTT 900
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01760___yb 851 ATTTAAGTAAAATTAACAAGGATTCCGATATCGAGGCAGATATTCCGCTT 900
BSNT_00345___ 901 CCTGACGGTGTCAAAAAAATCTCACCGTCAAAGGTGACTTTGCATATAGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 901 CCTGACGGTGTCAAAAAAATCTCACCGTCAAAGGTGACTTTGCATATAGA 950
BSNT_00345___ 951 AGTCGATAGTGAAGCGGATCAGAAGTTCGAGAATGTCCCTATCAAGACTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 951 AGTCGATAGTGAAGCGGATCAGAAGTTCGAGAATGTCCCTATCAAGACTG 1000
BSNT_00345___ 1001 TAGGGCTGAGCAGCTCACAAAACATTGAATATCTTGATCCTGAATCACAA 1050
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU01760___yb 1001 TAGGGCTGAGCAGCTCACAAAACATTGAATTTCTTGATCCTGAATCACAA 1050
BSNT_00345___ 1051 GCGATAGACGTAACGGCTAAAGGCTCTCCCGCGAATATAAAAAAACTGAA 1100
||||||||.|||||||||||||||||||||.||||||||||.||||||||
BSU01760___yb 1051 GCGATAGATGTAACGGCTAAAGGCTCTCCCACGAATATAAATAAACTGAA 1100
BSNT_00345___ 1101 AAAATCAGATATTGAATTGTATGTGAATGTTTCAGATTTAGAGGACGGGG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 1101 AAAATCAGATATTGAATTGTATGTGAATGTTTCAGATTTAGAGGACGGGG 1150
BSNT_00345___ 1151 AGCATAGCGTGAAGCTTGAAGTGAACGGGCCACAGAATGTAACCTGGTCC 1200
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU01760___yb 1151 AGCATAGCGTGAAGCTTGAAGTGAACGGGCCACAGAATGTAACTTGGTCC 1200
BSNT_00345___ 1201 TTGGGGCGGAAAAACGCCAAAATCAAGCTGACGTCTAAGAAAAGCAATAC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 1201 TTGGGGCGGAAAAACGCCAAAATCAAGCTGACGTCTAAGAAAAGCAATAC 1250
BSNT_00345___ 1251 ATCAACGAATGATAACAGCAGCAATACATCAGGGAACCAGGATGACACAG 1300
|||||||||||||||||||||||||||||||||||||||| |||||||
BSU01760___yb 1251 ATCAACGAATGATAACAGCAGCAATACATCAGGGAACCAG---GACACAG 1297
BSNT_00345___ 1301 ATAAACAAACAAATGATCAAAAGAACAATCAGCAAGAAGATACAAAGAAC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 1298 ATAAACAAACAAATGATCAAAAGAACAATCAGCAAGAAGATACAAAGAAC 1347
BSNT_00345___ 1351 ACTGATAAAAACAACAACGATCAAAACCAAGACGAAAATAAAGATCAAAA 1400
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU01760___yb 1348 ACTGATAAAAACAACAACGATCAAAACCAAGACGGAAATAAAGATCAAAA 1397
BSNT_00345___ 1401 CCAAGATCAGGATGAGGATGAATCCACTGCGAATTCACAATCCTCATCGG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb 1398 CCAAGATCAGGATGAGGATGAATCCACTGCGAATTCACAATCCTCATCGG 1447
BSNT_00345___ 1451 AATAA 1455
|||||
BSU01760___yb 1448 AATAA 1452
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