Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00213 and BSU01100

See DNA alignment / Visit BSNT_00213 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:12
# Commandline: needle
#    -asequence pep-align/BSNT_00213___rpsL.1.22522.seq
#    -bsequence pep-align/BSU01100___rpsL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00213___rpsL-BSU01100___rpsL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00213___rpsL-BSU01100___rpsL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00213___rpsL
# 2: BSU01100___rpsL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:     138/138 (100.0%)
# Similarity:   138/138 (100.0%)
# Gaps:           0/138 ( 0.0%)
# Score: 713.0
# 
#
#=======================================

BSNT_00213___      1 MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp      1 MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRV     50

BSNT_00213___     51 GTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp     51 GTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRV    100

BSNT_00213___    101 KDLPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK    138
                     ||||||||||||||||||||||||||||||||||||||
BSU01100___rp    101 KDLPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK    138


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.