Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00213 and BSU01100

See Amino acid alignment / Visit BSNT_00213 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:12
# Commandline: needle
#    -asequence dna-align/BSNT_00213___rpsL.1.22522.seq
#    -bsequence dna-align/BSU01100___rpsL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00213___rpsL-BSU01100___rpsL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00213___rpsL-BSU01100___rpsL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00213___rpsL
# 2: BSU01100___rpsL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity:     417/417 (100.0%)
# Similarity:   417/417 (100.0%)
# Gaps:           0/417 ( 0.0%)
# Score: 2085.0
# 
#
#=======================================

BSNT_00213___      1 ATGCCTACAATTAATCAGCTAATTCGCAAAGGACGCGTGAGTAAAGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp      1 ATGCCTACAATTAATCAGCTAATTCGCAAAGGACGCGTGAGTAAAGTAGA     50

BSNT_00213___     51 AAACTCAAAGTCTCCTGCACTTAACAAAGGATACAACAGCTTTAAAAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp     51 AAACTCAAAGTCTCCTGCACTTAACAAAGGATACAACAGCTTTAAAAAAG    100

BSNT_00213___    101 AGCACACTAACGTATCTTCTCCACAAAAACGCGGGGTATGTACTCGTGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp    101 AGCACACTAACGTATCTTCTCCACAAAAACGCGGGGTATGTACTCGTGTT    150

BSNT_00213___    151 GGTACAATGACACCGAAAAAACCGAACTCAGCACTTCGTAAATATGCTCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp    151 GGTACAATGACACCGAAAAAACCGAACTCAGCACTTCGTAAATATGCTCG    200

BSNT_00213___    201 TGTTCGTTTGACTAACGGAATCGAGGTTACTGCTTACATTCCTGGTATCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp    201 TGTTCGTTTGACTAACGGAATCGAGGTTACTGCTTACATTCCTGGTATCG    250

BSNT_00213___    251 GTCACAACCTGCAAGAGCACAGTGTTGTACTTATCCGCGGCGGACGTGTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp    251 GTCACAACCTGCAAGAGCACAGTGTTGTACTTATCCGCGGCGGACGTGTA    300

BSNT_00213___    301 AAAGACTTACCAGGGGTACGTTACCACATCGTTCGTGGTGCGCTTGATAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp    301 AAAGACTTACCAGGGGTACGTTACCACATCGTTCGTGGTGCGCTTGATAC    350

BSNT_00213___    351 TGCTGGAGTTGAAAACCGTGCACAAGGCCGTTCTAAATACGGTACGAAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01100___rp    351 TGCTGGAGTTGAAAACCGTGCACAAGGCCGTTCTAAATACGGTACGAAAA    400

BSNT_00213___    401 AACCTAAAGCAAAATAA    417
                     |||||||||||||||||
BSU01100___rp    401 AACCTAAAGCAAAATAA    417


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