Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00197 and BSU00980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:08
# Commandline: needle
# -asequence pep-align/BSNT_00197___sigH.1.22522.seq
# -bsequence pep-align/BSU00980___sigH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00197___sigH-BSU00980___sigH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00197___sigH-BSU00980___sigH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00197___sigH
# 2: BSU00980___sigH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 217/218 (99.5%)
# Similarity: 217/218 (99.5%)
# Gaps: 0/218 ( 0.0%)
# Score: 1092.0
#
#
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BSNT_00197___ 1 MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKA 50
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BSU00980___si 1 MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKA 50
BSNT_00197___ 51 RSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIIT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 51 RSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIIT 100
BSNT_00197___ 101 AIKTATRQKHIPLNSYVSLDKPIFDEESDRTLLDVISGAKTLNPEEMIIN 150
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00980___si 101 AIKTATRQKHIPLNSYASLDKPIFDEESDRTLLDVISGAKTLNPEEMIIN 150
BSNT_00197___ 151 QEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNAL 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 151 QEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNAL 200
BSNT_00197___ 201 QRVKRKLEKYLEIREISL 218
||||||||||||||||||
BSU00980___si 201 QRVKRKLEKYLEIREISL 218
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