Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00197 and BSU00980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:08
# Commandline: needle
# -asequence dna-align/BSNT_00197___sigH.1.22522.seq
# -bsequence dna-align/BSU00980___sigH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00197___sigH-BSU00980___sigH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00197___sigH-BSU00980___sigH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00197___sigH
# 2: BSU00980___sigH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 654/657 (99.5%)
# Similarity: 654/657 (99.5%)
# Gaps: 0/657 ( 0.0%)
# Score: 3258.0
#
#
#=======================================
BSNT_00197___ 1 GTGAATCTACAGAACAACAAGGGAAAATTCAACAAAGAGCAGTTTTGCCA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 1 GTGAATCTACAGAACAACAAGGGAAAATTCAACAAAGAGCAGTTTTGCCA 50
BSNT_00197___ 51 GTTGGAGGACGAGCAGGTCATTGAAAAGGTTCATGTTGGGGACAGTGATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 51 GTTGGAGGACGAGCAGGTCATTGAAAAGGTTCATGTTGGGGACAGTGATG 100
BSNT_00197___ 101 CGTTAGATTACTTGATTACGAAGTACCGAAACTTTGTTCGGGCAAAAGCA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 101 CGTTAGATTACTTGATTACGAAGTACCGAAACTTTGTTCGGGCAAAAGCA 150
BSNT_00197___ 151 AGATCCTATTTCTTAATAGGGGCGGACAGAGAGGATATTGTTCAGGAAGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 151 AGATCCTATTTCTTAATAGGGGCGGACAGAGAGGATATTGTTCAGGAAGG 200
BSNT_00197___ 201 CATGATAGGCCTCTATAAGTCTATTCGTGACTTCAAAGAGGACAAGCTTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 201 CATGATAGGCCTCTATAAGTCTATTCGTGACTTCAAAGAGGACAAGCTTA 250
BSNT_00197___ 251 CCTCATTCAAAGCTTTCGCAGAATTATGTATTACCCGCCAAATTATTACC 300
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00980___si 251 CCTCATTCAAAGCTTTTGCAGAATTATGTATTACCCGCCAAATTATTACC 300
BSNT_00197___ 301 GCAATAAAGACAGCTACTCGCCAGAAACACATTCCTTTGAATTCCTACGT 350
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU00980___si 301 GCAATAAAGACAGCTACTCGCCAGAAACACATTCCTTTGAATTCCTACGC 350
BSNT_00197___ 351 CTCATTAGATAAACCGATTTTTGATGAAGAATCAGACCGAACGCTGCTGG 400
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU00980___si 351 CTCATTAGATAAACCGATCTTTGATGAAGAATCAGACCGAACGCTGCTGG 400
BSNT_00197___ 401 ATGTCATTTCAGGAGCGAAAACCTTAAATCCTGAGGAAATGATCATTAAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 401 ATGTCATTTCAGGAGCGAAAACCTTAAATCCTGAGGAAATGATCATTAAT 450
BSNT_00197___ 451 CAGGAAGAATTTGATGATATTGAAATGAAAATGGGAGAACTATTAAGTGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 451 CAGGAAGAATTTGATGATATTGAAATGAAAATGGGAGAACTATTAAGTGA 500
BSNT_00197___ 501 TTTAGAGAGAAAAGTACTCGTCTTATATCTCGACGGGAGAAGTTACCAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 501 TTTAGAGAGAAAAGTACTCGTCTTATATCTCGACGGGAGAAGTTACCAAG 550
BSNT_00197___ 551 AGATTTCTGATGAACTGAACCGACATGTGAAATCGATCGACAATGCCCTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 551 AGATTTCTGATGAACTGAACCGACATGTGAAATCGATCGACAATGCCCTT 600
BSNT_00197___ 601 CAGCGTGTGAAACGCAAGCTGGAGAAGTACTTGGAAATTCGCGAAATCAG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00980___si 601 CAGCGTGTGAAACGCAAGCTGGAGAAGTACTTGGAAATTCGCGAAATCAG 650
BSNT_00197___ 651 TTTGTAA 657
|||||||
BSU00980___si 651 TTTGTAA 657
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