Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00129 and BSU00740

See DNA alignment / Visit BSNT_00129 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:03
# Commandline: needle
#    -asequence pep-align/BSNT_00129___pabB.1.22522.seq
#    -bsequence pep-align/BSU00740___pabB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00129___pabB-BSU00740___pabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00129___pabB-BSU00740___pabB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00129___pabB
# 2: BSU00740___pabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     462/498 (92.8%)
# Similarity:   465/498 (93.4%)
# Gaps:          28/498 ( 5.6%)
# Score: 2400.0
# 
#
#=======================================

BSNT_00129___      1 MEEKFTFFTHNIALQLKTSKKENRGMIQMAQRRPAGKKVPFQKDSFLQQF     50
                                                 ||||||||||:|||||||||||
BSU00740___pa      1 ----------------------------MAQRRPAGKKIPFQKDSFLQQF     22

BSNT_00129___     51 EKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa     23 EKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFK     72

BSNT_00129___    101 EGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa     73 EGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSL    122

BSNT_00129___    151 DDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQM    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    123 DDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQM    172

BSNT_00129___    201 WLTELPAVSLREMNPETDGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVN    250
                     ||||||||:.|||.|||.||||||||||||||||||||||||||||||||
BSU00740___pa    173 WLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVN    222

BSNT_00129___    251 LSIRQSQSLSAHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSK    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU00740___pa    223 LSIRQSQSLSVHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSK    272

BSNT_00129___    301 KGKLLETRPIAGTRSRGKTNEEDEVLANELIHNEKERAEHVMLVDLERND    350
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU00740___pa    273 KGKLLETRPIAGTRSRGKTNEEDEALANELIHNEKERAEHVMLVDLERND    322

BSNT_00129___    351 LGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFP    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    323 LGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFP    372

BSNT_00129___    401 GGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIY    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    373 GGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIY    422

BSNT_00129___    451 ATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSKEETKIR    498
                     |||||||||||||||||||||||||||||||||||||||||:||||||
BSU00740___pa    423 ATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR    470


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