Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00129 and BSU00740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:03
# Commandline: needle
# -asequence dna-align/BSNT_00129___pabB.1.22522.seq
# -bsequence dna-align/BSU00740___pabB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00129___pabB-BSU00740___pabB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00129___pabB-BSU00740___pabB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00129___pabB
# 2: BSU00740___pabB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1497
# Identity: 1391/1497 (92.9%)
# Similarity: 1391/1497 (92.9%)
# Gaps: 84/1497 ( 5.6%)
# Score: 6867.0
#
#
#=======================================
BSNT_00129___ 1 TTGGAAGAGAAATTCACTTTTTTCACTCACAACATTGCTTTACAATTAAA 50
BSU00740___pa 0 -------------------------------------------------- 0
BSNT_00129___ 51 AACAAGTAAAAAAGAAAATAGAGGAATGATACAAATGGCACAACGCAGAC 100
||||||||||||||||
BSU00740___pa 1 ----------------------------------ATGGCACAACGCAGAC 16
BSNT_00129___ 101 CGGCAGGCAAAAAAGTACCTTTTCAAAAAGACTCATTCTTACAACAATTT 150
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00740___pa 17 CGGCAGGCAAAAAAATACCTTTTCAAAAAGACTCATTCTTACAACAATTT 66
BSNT_00129___ 151 GAGAAACTTGCGCAATCCCGAAAACACCATGTACTTCTCGAAAGTGCAAG 200
||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU00740___pa 67 GAGAAACTTGCGCAATCCCGGAAACATCATGTACTTCTCGAAAGTGCAAG 116
BSNT_00129___ 201 AGGCGGCAGATACAGTATAGCCGGTCTTGATCCAATTGCGACTGTGAAAG 250
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU00740___pa 117 AGGCGGCAGATATAGTATAGCCGGTCTTGATCCAATTGCGACTGTGAAAG 166
BSNT_00129___ 251 GAAAAGACGGAATAACTACAATTAAGCATGGTGATGAGATGCTGTTTAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 167 GAAAAGACGGAATAACTACAATTAAGCATGGTGATGAGATGCTGTTTAAA 216
BSNT_00129___ 301 GAAGGTGATCCATTACGGGCCTTCCACAGCTGGTTTAAAACGCTGGAAAC 350
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU00740___pa 217 GAAGGTGATCCATTACGGGCCTTCCACAGCTGGTTTAAAACACTGGAAAC 266
BSNT_00129___ 351 AGAAACGAATCATGAGTTCCCTGACTTTCAAGGCGGGGCAATCGGGTTTC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 267 AGAAACGAATCATGAGTTCCCTGACTTTCAAGGCGGGGCAATCGGGTTTC 316
BSNT_00129___ 401 TCAGCTATGATTACGCACGGTACATTGAAAATTTTAAAATGCTCTCATTA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 317 TCAGCTATGATTACGCACGGTACATTGAAAATTTTAAAATGCTCTCATTA 366
BSNT_00129___ 451 GATGATCTAGAAACACCAGATATTTATTTTCTTGTTTTTGATGATATAGC 500
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 367 GATGATTTAGAAACACCAGATATTTATTTTCTTGTTTTTGATGATATAGC 416
BSNT_00129___ 501 AGTTTATGACCATCAAGAAGAGTCTCTATGGCTGATTACTCATGTTAATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 417 AGTTTATGACCATCAAGAAGAGTCTCTATGGCTGATTACTCATGTTAATG 466
BSNT_00129___ 551 GTTCTGATCAGGAAACAGCGGATGTGAAGCTATCTGAGTTAGAGCAGATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 467 GTTCTGATCAGGAAACAGCGGATGTGAAGCTATCTGAGTTAGAGCAGATG 516
BSNT_00129___ 601 TGGCTGACTGAGCTTCCCGCTGTCTCTTTGCGAGAGATGAACCCTGAAAC 650
|||.||||||||||||||||||||.|||.||||||||||||.||||||||
BSU00740___pa 517 TGGTTGACTGAGCTTCCCGCTGTCACTTCGCGAGAGATGAAGCCTGAAAC 566
BSNT_00129___ 651 AGATGGTTCCTTCGCGGCGCCATTTACCGAGGATGGGTTCTCACAAGCTG 700
||.||||||.||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 567 AGCTGGTTCTTTCGCGGCGCCATTTACCGAGGATGGGTTCTCACAAGCTG 616
BSNT_00129___ 701 TAGAGAAAATCAAACAATACATTGCCAGCGGAGATGTGTTTCAAGTCAAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 617 TAGAGAAAATCAAACAATACATTGCCAGCGGAGATGTGTTTCAAGTCAAT 666
BSNT_00129___ 751 CTATCAATAAGGCAGTCACAGTCACTGTCTGCCCACCCATATCAAATTTA 800
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU00740___pa 667 CTATCAATAAGGCAGTCACAGTCACTGTCTGTCCACCCATATCAAATTTA 716
BSNT_00129___ 801 CAAAACCTTGAGAGAAGTAAATCCTTCTCCTTATATGGCGTATTTAGAAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 717 CAAAACCTTGAGAGAAGTAAATCCTTCTCCTTATATGGCGTATTTAGAAA 766
BSNT_00129___ 851 CACCTGATTTCCAAATCATTTGCGGCTCGCCTGAACTGCTTGTCAGCAAA 900
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU00740___pa 767 CACCTGATTTCCAAATCATTTGCGGATCGCCTGAACTGCTTGTCAGCAAA 816
BSNT_00129___ 901 AAGGGCAAGCTATTAGAGACGAGACCGATTGCGGGCACCCGTTCCAGAGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 817 AAGGGCAAGCTATTAGAGACGAGACCGATTGCGGGCACCCGTTCCAGAGG 866
BSNT_00129___ 951 GAAAACAAATGAAGAAGACGAGGTGCTTGCAAACGAATTGATACACAATG 1000
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00740___pa 867 GAAAACAAATGAAGAAGACGAGGCGCTTGCAAACGAATTGATACACAATG 916
BSNT_00129___ 1001 AAAAAGAACGCGCGGAACATGTCATGCTGGTTGATCTTGAGCGAAATGAT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 917 AAAAAGAACGCGCGGAACATGTCATGCTGGTTGATCTTGAGCGAAATGAT 966
BSNT_00129___ 1051 CTGGGAAGAGTATCGCGTTACGGGTCTGTGCGCGTAAATGAATTCATGGC 1100
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00740___pa 967 CTGGGAAGAGTATCACGTTACGGGTCTGTGCGCGTAAATGAATTCATGGC 1016
BSNT_00129___ 1101 AATTGAAAAATACTCGCATGTAATGCACATTGTGTCTAATGTCCAAGGTG 1150
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU00740___pa 1017 AATTGAAAAATACTCGCATGTGATGCACATTGTGTCTAATGTCCAAGGTG 1066
BSNT_00129___ 1151 AACTGCAGGATGGGTATGATGCTGTTGATATTATTCATGCTGTGTTTCCC 1200
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU00740___pa 1067 AACTGCAGGATGGGTATGATGCTGTAGATATTATTCATGCTGTGTTTCCC 1116
BSNT_00129___ 1201 GGAGGAACCATTACTGGTGCACCGAAAGTAAGAACGATGGAAATAATAGA 1250
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU00740___pa 1117 GGAGGAACCATTACTGGTGCACCGAAAGTAAGAACGATGGAAATTATAGA 1166
BSNT_00129___ 1251 AGAACTTGAGCCGACACGCCGGGGGCTTTATACTGGATCTATAGGATGGT 1300
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU00740___pa 1167 AGAACTTGAGCCGACACGCCGAGGGCTTTATACTGGATCTATAGGATGGT 1216
BSNT_00129___ 1301 TTGGATATAATCACGATCTGCAGTTTAATATCGTCATTCGAACCATTTAT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 1217 TTGGATATAATCACGATCTGCAGTTTAATATCGTCATTCGAACCATTTAT 1266
BSNT_00129___ 1351 GCAACCGGAGGGCAGGCATTTATGCAGTCCGGCGCAGGAGTTGTGATTGA 1400
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU00740___pa 1267 GCAACCGGAGGGCAGGCATTTATGCAGTCCGGTGCAGGAGTTGTGATTGA 1316
BSNT_00129___ 1401 TTCTGTTCCGAAGCACGAATACAAGGAATCATTCAAAAAAGCTTTTGCGA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa 1317 TTCTGTTCCGAAGCACGAATACAAGGAATCATTCAAAAAAGCTTTTGCGA 1366
BSNT_00129___ 1451 TGCAAAGAGCATTAGAGCTGAGCAAAGAAGAGACAAAAATTAGATGA 1497
|||||||||||||||||||||||.|||||||||||||||||||||||
BSU00740___pa 1367 TGCAAAGAGCATTAGAGCTGAGCGAAGAAGAGACAAAAATTAGATGA 1413
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