Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00129 and BSU00740

See Amino acid alignment / Visit BSNT_00129 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:03
# Commandline: needle
#    -asequence dna-align/BSNT_00129___pabB.1.22522.seq
#    -bsequence dna-align/BSU00740___pabB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00129___pabB-BSU00740___pabB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00129___pabB-BSU00740___pabB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00129___pabB
# 2: BSU00740___pabB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1497
# Identity:    1391/1497 (92.9%)
# Similarity:  1391/1497 (92.9%)
# Gaps:          84/1497 ( 5.6%)
# Score: 6867.0
# 
#
#=======================================

BSNT_00129___      1 TTGGAAGAGAAATTCACTTTTTTCACTCACAACATTGCTTTACAATTAAA     50
                                                                       
BSU00740___pa      0 --------------------------------------------------      0

BSNT_00129___     51 AACAAGTAAAAAAGAAAATAGAGGAATGATACAAATGGCACAACGCAGAC    100
                                                       ||||||||||||||||
BSU00740___pa      1 ----------------------------------ATGGCACAACGCAGAC     16

BSNT_00129___    101 CGGCAGGCAAAAAAGTACCTTTTCAAAAAGACTCATTCTTACAACAATTT    150
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00740___pa     17 CGGCAGGCAAAAAAATACCTTTTCAAAAAGACTCATTCTTACAACAATTT     66

BSNT_00129___    151 GAGAAACTTGCGCAATCCCGAAAACACCATGTACTTCTCGAAAGTGCAAG    200
                     ||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU00740___pa     67 GAGAAACTTGCGCAATCCCGGAAACATCATGTACTTCTCGAAAGTGCAAG    116

BSNT_00129___    201 AGGCGGCAGATACAGTATAGCCGGTCTTGATCCAATTGCGACTGTGAAAG    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU00740___pa    117 AGGCGGCAGATATAGTATAGCCGGTCTTGATCCAATTGCGACTGTGAAAG    166

BSNT_00129___    251 GAAAAGACGGAATAACTACAATTAAGCATGGTGATGAGATGCTGTTTAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    167 GAAAAGACGGAATAACTACAATTAAGCATGGTGATGAGATGCTGTTTAAA    216

BSNT_00129___    301 GAAGGTGATCCATTACGGGCCTTCCACAGCTGGTTTAAAACGCTGGAAAC    350
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU00740___pa    217 GAAGGTGATCCATTACGGGCCTTCCACAGCTGGTTTAAAACACTGGAAAC    266

BSNT_00129___    351 AGAAACGAATCATGAGTTCCCTGACTTTCAAGGCGGGGCAATCGGGTTTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    267 AGAAACGAATCATGAGTTCCCTGACTTTCAAGGCGGGGCAATCGGGTTTC    316

BSNT_00129___    401 TCAGCTATGATTACGCACGGTACATTGAAAATTTTAAAATGCTCTCATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    317 TCAGCTATGATTACGCACGGTACATTGAAAATTTTAAAATGCTCTCATTA    366

BSNT_00129___    451 GATGATCTAGAAACACCAGATATTTATTTTCTTGTTTTTGATGATATAGC    500
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    367 GATGATTTAGAAACACCAGATATTTATTTTCTTGTTTTTGATGATATAGC    416

BSNT_00129___    501 AGTTTATGACCATCAAGAAGAGTCTCTATGGCTGATTACTCATGTTAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    417 AGTTTATGACCATCAAGAAGAGTCTCTATGGCTGATTACTCATGTTAATG    466

BSNT_00129___    551 GTTCTGATCAGGAAACAGCGGATGTGAAGCTATCTGAGTTAGAGCAGATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    467 GTTCTGATCAGGAAACAGCGGATGTGAAGCTATCTGAGTTAGAGCAGATG    516

BSNT_00129___    601 TGGCTGACTGAGCTTCCCGCTGTCTCTTTGCGAGAGATGAACCCTGAAAC    650
                     |||.||||||||||||||||||||.|||.||||||||||||.||||||||
BSU00740___pa    517 TGGTTGACTGAGCTTCCCGCTGTCACTTCGCGAGAGATGAAGCCTGAAAC    566

BSNT_00129___    651 AGATGGTTCCTTCGCGGCGCCATTTACCGAGGATGGGTTCTCACAAGCTG    700
                     ||.||||||.||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    567 AGCTGGTTCTTTCGCGGCGCCATTTACCGAGGATGGGTTCTCACAAGCTG    616

BSNT_00129___    701 TAGAGAAAATCAAACAATACATTGCCAGCGGAGATGTGTTTCAAGTCAAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    617 TAGAGAAAATCAAACAATACATTGCCAGCGGAGATGTGTTTCAAGTCAAT    666

BSNT_00129___    751 CTATCAATAAGGCAGTCACAGTCACTGTCTGCCCACCCATATCAAATTTA    800
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU00740___pa    667 CTATCAATAAGGCAGTCACAGTCACTGTCTGTCCACCCATATCAAATTTA    716

BSNT_00129___    801 CAAAACCTTGAGAGAAGTAAATCCTTCTCCTTATATGGCGTATTTAGAAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    717 CAAAACCTTGAGAGAAGTAAATCCTTCTCCTTATATGGCGTATTTAGAAA    766

BSNT_00129___    851 CACCTGATTTCCAAATCATTTGCGGCTCGCCTGAACTGCTTGTCAGCAAA    900
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU00740___pa    767 CACCTGATTTCCAAATCATTTGCGGATCGCCTGAACTGCTTGTCAGCAAA    816

BSNT_00129___    901 AAGGGCAAGCTATTAGAGACGAGACCGATTGCGGGCACCCGTTCCAGAGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    817 AAGGGCAAGCTATTAGAGACGAGACCGATTGCGGGCACCCGTTCCAGAGG    866

BSNT_00129___    951 GAAAACAAATGAAGAAGACGAGGTGCTTGCAAACGAATTGATACACAATG   1000
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00740___pa    867 GAAAACAAATGAAGAAGACGAGGCGCTTGCAAACGAATTGATACACAATG    916

BSNT_00129___   1001 AAAAAGAACGCGCGGAACATGTCATGCTGGTTGATCTTGAGCGAAATGAT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa    917 AAAAAGAACGCGCGGAACATGTCATGCTGGTTGATCTTGAGCGAAATGAT    966

BSNT_00129___   1051 CTGGGAAGAGTATCGCGTTACGGGTCTGTGCGCGTAAATGAATTCATGGC   1100
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00740___pa    967 CTGGGAAGAGTATCACGTTACGGGTCTGTGCGCGTAAATGAATTCATGGC   1016

BSNT_00129___   1101 AATTGAAAAATACTCGCATGTAATGCACATTGTGTCTAATGTCCAAGGTG   1150
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU00740___pa   1017 AATTGAAAAATACTCGCATGTGATGCACATTGTGTCTAATGTCCAAGGTG   1066

BSNT_00129___   1151 AACTGCAGGATGGGTATGATGCTGTTGATATTATTCATGCTGTGTTTCCC   1200
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU00740___pa   1067 AACTGCAGGATGGGTATGATGCTGTAGATATTATTCATGCTGTGTTTCCC   1116

BSNT_00129___   1201 GGAGGAACCATTACTGGTGCACCGAAAGTAAGAACGATGGAAATAATAGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU00740___pa   1117 GGAGGAACCATTACTGGTGCACCGAAAGTAAGAACGATGGAAATTATAGA   1166

BSNT_00129___   1251 AGAACTTGAGCCGACACGCCGGGGGCTTTATACTGGATCTATAGGATGGT   1300
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU00740___pa   1167 AGAACTTGAGCCGACACGCCGAGGGCTTTATACTGGATCTATAGGATGGT   1216

BSNT_00129___   1301 TTGGATATAATCACGATCTGCAGTTTAATATCGTCATTCGAACCATTTAT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa   1217 TTGGATATAATCACGATCTGCAGTTTAATATCGTCATTCGAACCATTTAT   1266

BSNT_00129___   1351 GCAACCGGAGGGCAGGCATTTATGCAGTCCGGCGCAGGAGTTGTGATTGA   1400
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU00740___pa   1267 GCAACCGGAGGGCAGGCATTTATGCAGTCCGGTGCAGGAGTTGTGATTGA   1316

BSNT_00129___   1401 TTCTGTTCCGAAGCACGAATACAAGGAATCATTCAAAAAAGCTTTTGCGA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00740___pa   1317 TTCTGTTCCGAAGCACGAATACAAGGAATCATTCAAAAAAGCTTTTGCGA   1366

BSNT_00129___   1451 TGCAAAGAGCATTAGAGCTGAGCAAAGAAGAGACAAAAATTAGATGA   1497
                     |||||||||||||||||||||||.|||||||||||||||||||||||
BSU00740___pa   1367 TGCAAAGAGCATTAGAGCTGAGCGAAGAAGAGACAAAAATTAGATGA   1413


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