Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06288 and BPUM_3733

See DNA alignment / Visit BSNT_06288 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_06288___trmE.1.24716.seq
#    -bsequence pep-align/BPUM_3733___trmE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06288___trmE-BPUM_3733___trmE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06288___trmE-BPUM_3733___trmE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06288___trmE
# 2: BPUM_3733___trmE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity:     400/459 (87.1%)
# Similarity:   437/459 (95.2%)
# Gaps:           0/459 ( 0.0%)
# Score: 2027.0
# 
#
#=======================================

BSNT_06288___      1 MDTIAAISTPMGEGAIAIVRLSGPEAIQIADKIYKGPKGKTLSSVESHTI     50
                     ||||||||||||||||||:|||||||:||||::|||||.|.|.||:||||
BPUM_3733___t      1 MDTIAAISTPMGEGAIAIIRLSGPEAVQIADRMYKGPKEKKLVSVDSHTI     50

BSNT_06288___     51 HYGHIVDRPSDRVVEEVMVSVLKAPRTFTREDVIEINCHGGIVTVNQVLQ    100
                     |||||||..:|:|:||||||||:||:||||||||||||||||||||:|||
BPUM_3733___t     51 HYGHIVDARTDQVIEEVMVSVLRAPKTFTREDVIEINCHGGIVTVNKVLQ    100

BSNT_06288___    101 LALREGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMN    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||:.
BPUM_3733___t    101 LALREGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAIT    150

BSNT_06288___    151 QMEGRLSALVRRLRSEILETLAHVEVNIDYPEYDDVEEMTHQILVEKATA    200
                     |||||||.||:|||.||||||||:|||||||||||||||||::||||||:
BPUM_3733___t    151 QMEGRLSGLVQRLRGEILETLAHIEVNIDYPEYDDVEEMTHRVLVEKATS    200

BSNT_06288___    201 VKKEIEALLRTSEQGKILREGLSTVIIGRPNVGKSSLLNSLVHEAKAIVT    250
                     ||||||:||.||.|||||||||||||||||||||||||||||.|.|||||
BPUM_3733___t    201 VKKEIESLLSTSHQGKILREGLSTVIIGRPNVGKSSLLNSLVQETKAIVT    250

BSNT_06288___    251 DIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRQVLKE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_3733___t    251 DIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRQVLKE    300

BSNT_06288___    301 ADLILLVLNYSEELSEEDVKLFEAVEGMDVIVILNKTDLEAKIDTERVRE    350
                     ||||||||||||||||||:||||||.|||:|||:||||||.|:|.|:|::
BPUM_3733___t    301 ADLILLVLNYSEELSEEDIKLFEAVSGMDIIVIVNKTDLEPKLDVEKVKQ    350

BSNT_06288___    351 LANGRPVVTTSLLKEEGINDLEEAIQSLFYTGAIESGDLTYVSNTRHISI    400
                     ||..|||||||||:|:||::||.||||||:||:|||||||||||||||::
BPUM_3733___t    351 LAKDRPVVTTSLLQEKGIDELEMAIQSLFFTGSIESGDLTYVSNTRHIAL    400

BSNT_06288___    401 LQQAKRAIEDALSGIEQDVPIDMVQIDLTRCWELLGEIIGDSVHESLIDQ    450
                     ||.||::|||||.|||.|||||:||||||||||.|||||||:||||||||
BPUM_3733___t    401 LQAAKQSIEDALEGIEMDVPIDIVQIDLTRCWEQLGEIIGDAVHESLIDQ    450

BSNT_06288___    451 LFSQFCLGK    459
                     |||||||||
BPUM_3733___t    451 LFSQFCLGK    459


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