Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06286 and BPUM_3731

See DNA alignment / Visit BSNT_06286 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_06286___gidB.1.24716.seq
#    -bsequence pep-align/BPUM_3731___gidB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06286___gidB-BPUM_3731___gidB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06286___gidB-BPUM_3731___gidB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06286___gidB
# 2: BPUM_3731___gidB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     184/239 (77.0%)
# Similarity:   217/239 (90.8%)
# Gaps:           0/239 ( 0.0%)
# Score: 983.0
# 
#
#=======================================

BSNT_06286___      1 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEV     50
                     ||||:||:.|.||||:|||.||||||.|:.||||||||:||||||||:||
BPUM_3731___g      1 MNIEQFTAALEEKGITLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEV     50

BSNT_06286___     51 YLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVD    100
                     |||||||||:|:|::||::|.||||:||||||||:|:|||||||:|||||
BPUM_3731___g     51 YLKHFYDSISASFFIDFHKVTTICDIGAGAGFPSIPLKICFPHLHVTIVD    100

BSNT_06286___    101 SLNKRITFLEKLSEALQLENTTYCHDRAETFGQRKDVRESYDIVTARAVA    150
                     ||.||||||.:|::.|.|::||:.|||||||||||:.|||||:|||||||
BPUM_3731___g    101 SLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKEKRESYDLVTARAVA    150

BSNT_06286___    151 RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHS    200
                     |||||||||||||||.||||||||::|:||:.|||||:|.||||:...||
BPUM_3731___g    151 RLSVLSELCLPLVKKEGLFVALKASAADEEMQAGKKAVTVLGGEVVEKHS    200

BSNT_06286___    201 FKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPIEG    239
                     |.||:|||:|||:||.|.|.|||||||||||||||||||
BPUM_3731___g    201 FVLPLEESERNIIVIEKKKQTPKKYPRKPGTPNKSPIEG    239


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