Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06286 and BPUM_3731
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_06286___gidB.1.24716.seq
# -bsequence dna-align/BPUM_3731___gidB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06286___gidB-BPUM_3731___gidB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06286___gidB-BPUM_3731___gidB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06286___gidB
# 2: BPUM_3731___gidB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 746
# Identity: 527/746 (70.6%)
# Similarity: 527/746 (70.6%)
# Gaps: 52/746 ( 7.0%)
# Score: 1779.5
#
#
#=======================================
BSNT_06286___ 1 ATGAATATTGAAGAATTTACTTCTGGTTTGGCGGAAAAAGGGATCTCCCT 50
|||||.||||||.|||||||..|.|...|.|.|||.|||||||||.|.||
BPUM_3731___g 1 ATGAACATTGAACAATTTACAGCAGCACTAGAGGAGAAAGGGATCACTCT 50
BSNT_06286___ 51 TTCTCCCCGT-CAGCTAGAGCAATTTG-AGCTGTA-TTACGACATGCTGG 97
|||| ||.|| |||||.||.||||||| |.|| || ||.|| ||||||.|
BPUM_3731___g 51 TTCT-CCTGTGCAGCTTGAACAATTTGAAACT-TACTTCCG-CATGCTTG 97
BSNT_06286___ 98 TTGAATGGAACGAAAAAATCAATCTGACTTCAATAACAGAGAAAAAAGAA 147
|.|||||||||||.|||||.|||.||||.||.||.||.||.||..|||||
BPUM_3731___g 98 TAGAATGGAACGAGAAAATGAATTTGACGTCCATTACTGAAAAGGAAGAA 147
BSNT_06286___ 148 GTGTATTTAAAGCATTTTTATGATTCCATTACAGCTGCTTTTTATGTCGA 197
||||||||||||||||||||||||||||||.|.||..|.||||...|.||
BPUM_3731___g 148 GTGTATTTAAAGCATTTTTATGATTCCATTTCCGCATCATTTTTCATTGA 197
BSNT_06286___ 198 CTTCAATCAGGTGAACACGATTTGTGATGTCGGAGCGGGAGCGGGTTTTC 247
.||..|..|.||||..||||||||.|||.|.|||||.||.||.|||||.|
BPUM_3731___g 198 TTTTCACAAAGTGACGACGATTTGCGATATTGGAGCTGGTGCTGGTTTCC 247
BSNT_06286___ 248 CAAGTCTGCCGATAAAAATATGCTTTCCGCACCTCAATGTCACAATCGTA 297
|.||..|.||..|.|||||.|||||.||.||.||..||||.||.||.||.
BPUM_3731___g 248 CGAGCATTCCTCTTAAAATTTGCTTCCCTCATCTACATGTGACCATTGTT 297
BSNT_06286___ 298 GATTCACTGAATAAACGGATCACGTTT---------TTAGAAAAGCTATC 338
|||||.||..|.|||||.||.|||||| ||||.|||
BPUM_3731___g 298 GATTCTCTTCAGAAACGAATTACGTTTCTTAATGAGTTAGCAAA------ 341
BSNT_06286___ 339 TGAGGCTTTGCAATTGGAGAA---TACAACATACTGC-------CATGAC 378
|||.|| || |||||.|||||.| |||||.
BPUM_3731___g 342 --AGGGTT-----------AAACTTACAAGATACTACTTTTTATCATGAT 378
BSNT_06286___ 379 AGAGCTGAAACGTTCGGGCAACGGAAAGACGTGCGTGAAAGCTATGATAT 428
.|.||.||.|||||.||.|||||.||.||...||||||||||||||||.|
BPUM_3731___g 379 CGTGCGGAGACGTTTGGACAACGTAAGGAAAAGCGTGAAAGCTATGATCT 428
BSNT_06286___ 429 TGTGACAGCGCGAGCAGTTGCGAGATTATCTGTTTTGAGTGAGCTTTGCT 478
|||.||.||..|||||||||||.|..|||||||.|||||.||.||.||..
BPUM_3731___g 429 TGTCACTGCTAGAGCAGTTGCGCGTCTATCTGTCTTGAGCGAACTATGTC 478
BSNT_06286___ 479 TGCCTCTGGTGAAGAAAAACGGTTTATTTGTTGCTTTAAAAGCCGCATCA 528
|.||.||.||.||.||..|.||..|.|||||.||.||||||||..|..|.
BPUM_3731___g 479 TCCCCCTTGTAAAAAAGGAAGGGCTGTTTGTGGCATTAAAAGCATCTGCT 528
BSNT_06286___ 529 GCGGAAGAAGAACTGAATGCAGGCAAAAAAGCAATCAC-GACGCTTGGAG 577
||.||.||||||.||.|.|||||.||||||||..|.|| |.| ||.||||
BPUM_3731___g 529 GCTGATGAAGAAATGCAAGCAGGGAAAAAAGCCGTTACTGTC-CTCGGAG 577
BSNT_06286___ 578 GAGAACTTG-AGAATATCCATTCTTTTAAGCTGCCTATTGAAGAAAGCGA 626
||||..||| .||| |..|||||.|||...||.|||.|.|||||||||||
BPUM_3731___g 578 GAGAGGTTGTTGAA-AAGCATTCCTTTGTTCTTCCTTTAGAAGAAAGCGA 626
BSNT_06286___ 627 TCGTAATATTATGGTGATACGCAAAATAAAAA--ATACACCTAAGAAGTA 674
.||.||.|||||.||.|| ..||||.||||| |.|||||.||.||.||
BPUM_3731___g 627 ACGAAACATTATTGTCAT--TGAAAAGAAAAAGCAAACACCAAAAAAATA 674
BSNT_06286___ 675 TCCAAGAAAACCGGGAACTCCTAATAAATCGCCAATTGAAGGGTAA 720
|||.||||||||.|||||.|||||||||||.|||||.|||||.|.|
BPUM_3731___g 675 TCCTAGAAAACCAGGAACACCTAATAAATCACCAATAGAAGGTTGA 720
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