Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06281 and BPUM_3728

See DNA alignment / Visit BSNT_06281 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_06281___soj.1.24716.seq
#    -bsequence pep-align/BPUM_3728___soj.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06281___soj-BPUM_3728___soj.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06281___soj-BPUM_3728___soj.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06281___soj
# 2: BPUM_3728___soj
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     238/266 (89.5%)
# Similarity:   248/266 (93.2%)
# Gaps:          13/266 ( 4.9%)
# Score: 1204.0
# 
#
#=======================================

BSNT_06281___      1 -------------MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLV     37
                                  :||||||||||||||||||||||.|||||||||||||
BPUM_3728___s      1 MNEKLVKLKVGVIVGKIIAITNQKGGVGKTTTSVNLSACLAYIGKRVLLV     50

BSNT_06281___     38 DIDPQGNATSGLGIEKADVEQCVYDILVDDADVIDIIKATTVENLDVIPA     87
                     |||||||||||:||||||||:||||||||||||:|:||.|.|||||||||
BPUM_3728___s     51 DIDPQGNATSGIGIEKADVEKCVYDILVDDADVLDVIKTTEVENLDVIPA    100

BSNT_06281___     88 TIQLAGAEIELVPTISREVRLKRALEAVKQNYDYIIIDCPPSLGLLTINA    137
                     ||||||||||||||||||||||||||:|||||||:|||||||||||||||
BPUM_3728___s    101 TIQLAGAEIELVPTISREVRLKRALESVKQNYDYMIIDCPPSLGLLTINA    150

BSNT_06281___    138 LTASDSVVIPVQCEYYALEGLSQLLNTVRLVQKHLNTDLMIEGVLLTMLD    187
                     |||||||:|||||||||||||||||||||||||||||||.||||||||||
BPUM_3728___s    151 LTASDSVLIPVQCEYYALEGLSQLLNTVRLVQKHLNTDLAIEGVLLTMLD    200

BSNT_06281___    188 ARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSR    237
                     ||||||||||||||||||||||:|||||||||||||||||||||||||||
BPUM_3728___s    201 ARTNLGIQVIEEVKKYFRDKVYQTVIPRNVRLSEAPSHGKPIILYDPRSR    250

BSNT_06281___    238 GAEVYLDLAKEVAANG    253
                     ||:|||||||||.|||
BPUM_3728___s    251 GADVYLDLAKEVDANG    266


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