Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06281 and BPUM_3728
See
Amino acid alignment /
Visit
BSNT_06281 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_06281___soj.1.24716.seq
# -bsequence dna-align/BPUM_3728___soj.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06281___soj-BPUM_3728___soj.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06281___soj-BPUM_3728___soj.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06281___soj
# 2: BPUM_3728___soj
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 809
# Identity: 619/809 (76.5%)
# Similarity: 619/809 (76.5%)
# Gaps: 55/809 ( 6.8%)
# Score: 2452.0
#
#
#=======================================
BSNT_06281___ 1 ---------------------------------------GTGGGAAAAAT 11
|||||||||||
BPUM_3728___s 1 ATGAATGAGAAACTTGTTAAGTTGAAAGTGGGTGTCATCGTGGGAAAAAT 50
BSNT_06281___ 12 CATAGCAATTACGAACCAAAAAGGCGGGGTCGGCAAAACAACGACGTCTG 61
||||||.|||||.|||||.||.|||||.|||||.||.||.||.||.||||
BPUM_3728___s 51 CATAGCGATTACCAACCAGAAGGGCGGCGTCGGGAAGACGACAACTTCTG 100
BSNT_06281___ 62 TCAACCTTG-GGGCATGTTTGGCTTACATAGGGAAAAGGGTTCTGCTGGT 110
|.|| .||| |.||.|||||.||.||||||||.|||.|.||..||.|.||
BPUM_3728___s 101 TTAA-TTTGAGTGCGTGTTTAGCATACATAGGTAAACGAGTGTTGTTAGT 149
BSNT_06281___ 111 AGATATTGATCCGCAGGGAAATGCGACAAGCGG-ATTAGGGATTGAAAAA 159
.|||||||||||||||||.|||||.||.||.|| ||| ||||||||.||.
BPUM_3728___s 150 TGATATTGATCCGCAGGGTAATGCCACGAGTGGTATT-GGGATTGAGAAG 198
BSNT_06281___ 160 GCCGATGTAGAGCAGTGTGTGTACGATATTTTAGTAGATGATGCAGATGT 209
|||||.|||||..||||.|||||||||||||||||.||||||||||||||
BPUM_3728___s 199 GCCGACGTAGAAAAGTGCGTGTACGATATTTTAGTTGATGATGCAGATGT 248
BSNT_06281___ 210 AATAGATATTATTAAAGCAACGACA---GTAGAGAACTTGGATGTGATTC 256
..|.|||.|.||||| .|||||| ||.||.||..|.|||||.||||
BPUM_3728___s 249 TCTTGATGTGATTAA---GACGACAGAGGTCGAAAATCTCGATGTCATTC 295
BSNT_06281___ 257 CTGCGACGATTCAGCTTGCCGGGGCTGAGATCGAGCTGGTTCCTACAATA 306
||||||||||.||.|||||.||||||||.||.|||||.||.|||||.||.
BPUM_3728___s 296 CTGCGACGATACAACTTGCAGGGGCTGAAATAGAGCTTGTGCCTACGATT 345
BSNT_06281___ 307 TCAAGAGAAGTGAGATTGAAGAGAGCGCTTGAAGCAGTAAAGCAAAATTA 356
|||.||||||||||||||||||||||.|||||..|.||.|||||||||||
BPUM_3728___s 346 TCACGAGAAGTGAGATTGAAGAGAGCACTTGAGTCTGTTAAGCAAAATTA 395
BSNT_06281___ 357 TGATTATATTATCATTGATTGTCCGCCGTCATTGGGCTTGCTGACGATTA 406
|||||||||.||.|||||.||.|||||.|||.|.||.||.||||||||||
BPUM_3728___s 396 TGATTATATGATTATTGACTGCCCGCCATCACTCGGATTACTGACGATTA 445
BSNT_06281___ 407 ACGCCCTTACTGCCTCGGATTCCGTTGTGATTCCTGTACAGTGCGAATAT 456
|.||..|.||.||.||.|||||||||.|.|||||.||||||||.||||||
BPUM_3728___s 446 ATGCGTTAACCGCATCCGATTCCGTTTTAATTCCGGTACAGTGTGAATAT 495
BSNT_06281___ 457 TATGC-CTTGGAGGGGCTCAGCCAGTTATTAAATACAGTACGTCTTGTGC 505
||||| ||| ||.||..|.|||||.||||||||.||.||.|||||.||||
BPUM_3728___s 496 TATGCGCTT-GAAGGATTGAGCCAATTATTAAACACTGTTCGTCTCGTGC 544
BSNT_06281___ 506 AAAAGCATTTGAATACTGATTTAATG--ATTGAAGGTGTATTGCTGACAA 553
|.||.|||||.|||||.|||.| || ||||||||||||||||||||||
BPUM_3728___s 545 AGAAACATTTAAATACGGATCT--TGCCATTGAAGGTGTATTGCTGACAA 592
BSNT_06281___ 554 TGCTTGATGCCCGGACAAACCTTGGCATTCAAGTGATTGAAGAGGTTAAA 603
||||||||||.||.|||||.|||||.||||||||.||.|||||.||.||.
BPUM_3728___s 593 TGCTTGATGCACGAACAAATCTTGGGATTCAAGTCATCGAAGAAGTGAAG 642
BSNT_06281___ 604 AAGTATTTTAGGGATAAAGTATATAAGACAGTTATTCCGCGTAATGTCCG 653
||.||.||.||.|||||.||.|||.||||.||.||||||||.|||||..|
BPUM_3728___s 643 AAATACTTCAGAGATAAGGTCTATCAGACCGTGATTCCGCGAAATGTAAG 692
BSNT_06281___ 654 TCTGAGTGAGGCACCGAGTCACGGAAAACCCATCATTTTATACGATCCGC 703
.||||||||.||.||.|||||.||.|||||.||.||.||.||.|||||.|
BPUM_3728___s 693 ACTGAGTGAAGCGCCTAGTCATGGGAAACCGATTATCTTGTATGATCCAC 742
BSNT_06281___ 704 GGTCAAGAGGTGCGGAAGTATATTTAGATTTAGCAAAGGAAGTGGCTGCG 753
|.|||||||||||.||.||.||||||||.||||||||||||||||.||||
BPUM_3728___s 743 GTTCAAGAGGTGCAGATGTCTATTTAGACTTAGCAAAGGAAGTGGATGCG 792
BSNT_06281___ 754 AATGGCTAA 762
|||||||||
BPUM_3728___s 793 AATGGCTAA 801
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.