Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06278 and BPUM_3726

See DNA alignment / Visit BSNT_06278 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence pep-align/BSNT_06278___yyaC.1.24716.seq
#    -bsequence pep-align/BPUM_3726___yyaC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06278___yyaC-BPUM_3726___yyaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06278___yyaC-BPUM_3726___yyaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06278___yyaC
# 2: BPUM_3726___yyaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity:     142/225 (63.1%)
# Similarity:   174/225 (77.3%)
# Gaps:          21/225 ( 9.3%)
# Score: 751.5
# 
#
#=======================================

BSNT_06278___      1 ----------------MNRKGGLFSSQERVKQYVSHTDAAAAKQIQTILS     34
                                     ||.|.||| .:.|||:||||||..|.:|:::||.
BPUM_3726___y      1 MFPYTVTNYYDKEVRPMNSKNGLF-FRNRVKEYVSHTDTNAIQQLKSILF     49

BSNT_06278___     35 SSLRKAAGKPIVVVCIGTDRSTGDSLGPLVGMKLKQMQLTRFHVYGTLSD     84
                     |.|:||..:|:.:||||||||||||||||||.||..:.|.:.||||||||
BPUM_3726___y     50 SHLQKAGKRPVAIVCIGTDRSTGDSLGPLVGTKLSGLDLKKLHVYGTLSD     99

BSNT_06278___     85 PVHAVNMKDKINDIHKLHKNPFVIAVDACLGRVKSVGSFQIGDGPLKPGA    134
                     ||||||:|:|:.:|.:.||:||::|:||||||||||||||||||||||||
BPUM_3726___y    100 PVHAVNLKEKLAEIEQAHKHPFIVAIDACLGRVKSVGSFQIGDGPLKPGA    149

BSNT_06278___    135 GVQKDLPEVGDLHINGIVNVSGFMEYFVLQNTRLNLVMNMANVLAEGLSL    184
                     ||||:||||||:||||||||||||||||||||||:|||:|||.|:|.||.
BPUM_3726___y    150 GVQKELPEVGDIHINGIVNVSGFMEYFVLQNTRLHLVMSMANTLSESLSH    199

BSNT_06278___    185 TDRTEWRQER----LNPLQRLTGRI    205
                     .|:.:|.:|:    ..|:|.:||||
BPUM_3726___y    200 IDQMDWTREKSRSLFAPIQNITGRI    224


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