Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06271 and BPUM_3720

See DNA alignment / Visit BSNT_06271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence pep-align/BSNT_06271___rpsF.1.24716.seq
#    -bsequence pep-align/BPUM_3720___rpsF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06271___rpsF-BPUM_3720___rpsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06271___rpsF-BPUM_3720___rpsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06271___rpsF
# 2: BPUM_3720___rpsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      89/95 (93.7%)
# Similarity:    93/95 (97.9%)
# Gaps:           0/95 ( 0.0%)
# Score: 459.0
# 
#
#=======================================

BSNT_06271___      1 MRKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAY     50
                     ||||||||||||.:|:|:||||||||||||||||||||||||||||||||
BPUM_3720___r      1 MRKYEVMYIIRPTVDDEAKKAVIERFNNVLTSNGAEITGTKDWGKRRLAY     50

BSNT_06271___     51 EINDFRDGFYQIVNVQSDAAAVQEFDRLAKISDDIIRHIVVKEEE     95
                     ||||||:|||||||||||||||||||||||||||||||||||||.
BPUM_3720___r     51 EINDFREGFYQIVNVQSDAAAVQEFDRLAKISDDIIRHIVVKEEV     95


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.